RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PDIA2Q13087 525 aaKnown RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 SIM2Q14190 667 aaPredicted RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 FAM124AQ86V42 546 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 NXPE1Q8N323 547 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 FBXO36Q8NEA4 188 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 FUBP1Q96AE4 644 aaKnown RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 PKNOX2Q96KN3 472 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 HSPA12BQ96MM6 686 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 EPB41L4BQ9H329 900 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 FKBPLQ9UIM3 349 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 ZFC3H1O60293 1989 aaKnown RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 SPTY2D1-AS1A0A0U1RR47 76 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 CCDC162PA2VCL2 907 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 NEMP1O14524 444 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 POLD2P49005 469 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 AFF3P51826 1226 aaKnown RBP13.16□□□□□ -0.3
USP44-202ENST00000393091 LRRC73Q5JTD7 316 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 TEX35Q5T0J7 233 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 GABPB2Q8TAK5 448 aaPredicted RBP13.16□□□□□ -0.3
USP44-202ENST00000393091 ZNF778Q96MU6 729 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 DHRS4Q9BTZ2 278 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 TRIM31Q9BZY9 425 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 ZDHHC3Q9NYG2 299 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 SLC2A6Q9UGQ3 507 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 ZC3H7BQ9UGR2 993 aaKnown RBP13.16□□□□□ -0.3
USP44-202ENST00000393091 PCDHGB2Q9Y5G2 931 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 QSOX1O00391 747 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 WNT1P04628 370 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 KELP23276 732 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 CD38P28907 300 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 CTSKP43235 329 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 MARK2Q7KZI7 788 aaKnown RBP13.16□□□□□ -0.3
USP44-202ENST00000393091 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.16□□□□□ -0.3
USP44-202ENST00000393091 PLA2G15Q8NCC3 412 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 ZNF398Q8TD17 642 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 ZNF514Q96K75 400 aaPredicted RBP13.16□□□□□ -0.3
USP44-202ENST00000393091 LRRC4CQ9HCJ2 640 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 MAP3K13O43283 966 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 DNAJC6O75061 913 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 GOT2P00505 430 aaKnown RBP13.16□□□□□ -0.3
USP44-202ENST00000393091 RHOXF2BP0C7M4 288 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 PIRTP0C851 137 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 ITGALP20701 1170 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 MRPS25P82663 173 aaKnown RBP13.16□□□□□ -0.3
USP44-202ENST00000393091 CHRNA6Q15825 494 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 DBX2Q6ZNG2 339 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 RFLNAQ6ZTI6 216 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 CILP2Q8IUL8 1156 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 SLC22A18ASQ8N1D0 253 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 CERS2Q96G23 380 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 RHOXF2Q9BQY4 288 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 NINJ2Q9NZG7 142 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.16□□□□□ -0.3
USP44-202ENST00000393091 NFU1Q9UMS0 254 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 COQ6Q9Y2Z9 468 aa13.16□□□□□ -0.3
USP44-202ENST00000393091 MEI4A8MW99 385 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 GOLGA8MH3BSY2 632 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 BCAT2O15382 392 aaPredicted RBP13.15□□□□□ -0.3
USP44-202ENST00000393091 SGTAO43765 313 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 PRAMEF1O95521 474 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 MC4RP32245 332 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 STX2P32856 288 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 TTPAP49638 278 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 BRD3Q15059 726 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 ATP13A5Q4VNC0 1218 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 TEDDM1Q5T9Z0 273 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 IL27RAQ6UWB1 636 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 KANSL1Q7Z3B3 1105 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 PHYKPLQ8IUZ5 450 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 PELI3Q8N2H9 469 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 MFSD3Q96ES6 412 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 PARD6BQ9BYG5 372 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 PHPT1Q9NRX4 125 aaPredicted RBP13.15□□□□□ -0.3
USP44-202ENST00000393091 SMG5Q9UPR3 1016 aaKnown RBP13.15□□□□□ -0.3
USP44-202ENST00000393091 RPS6KL1Q9Y6S9 549 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 FSBPO95073 299 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 PAK4O96013 591 aaPredicted RBP13.15□□□□□ -0.3
USP44-202ENST00000393091 MYBL2P10244 700 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 GNSP15586 552 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 PPARGP37231 505 aaPredicted RBP13.15□□□□□ -0.3
USP44-202ENST00000393091 VSNL1P62760 191 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 BNC1Q01954 994 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 FASTKD3Q14CZ7 662 aaKnown RBP13.15□□□□□ -0.3
USP44-202ENST00000393091 TEAD4Q15561 434 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 ADGRG6Q86SQ4 1221 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.3
USP44-202ENST00000393091 PYROXD1Q8WU10 500 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 HDAC10Q969S8 669 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 SKA1Q96BD8 255 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 SERAC1Q96JX3 654 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 AGAP2Q99490 1192 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 WDR26Q9H7D7 661 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 SAYSD1Q9NPB0 183 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 CATSPERZQ9NTU4 200 aa13.15□□□□□ -0.3
USP44-202ENST00000393091 C17orf113A0A1B0GUU1 675 aa13.14□□□□□ -0.31
USP44-202ENST00000393091 CD3EAPO15446 510 aaKnown RBP13.14□□□□□ -0.31
USP44-202ENST00000393091 PTGER3P43115 390 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms