RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 MAGP20916 626 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 CCNCP24863 283 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 ARL2P36404 184 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 YBEYP58557 167 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 ACAP2Q15057 778 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 CCDC80Q76M96 950 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 ZNF655Q8N720 491 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 GPR21Q99679 349 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 TMEM138Q9NPI0 162 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 PDP1Q9P0J1 537 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 MBD2Q9UBB5 411 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.07□□□□□ -0.32
LCA5-202ENST00000392959 COQ4Q9Y3A0 265 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 TCAF1Q9Y4C2 921 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 MROH2AA6NES4 1674 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 CLDN11O75508 207 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 LGALS3BPQ08380 585 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 LIN54Q6MZP7 749 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 TRMT10BQ6PF06 316 aaKnown RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 LDB1Q86U70 411 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 AKAP14Q86UN6 197 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 CFAP52Q8N1V2 620 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 FSTL5Q8N475 847 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 UBR7Q8N806 425 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 HM13Q8TCT9 377 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 DQX1Q8TE96 717 aaKnown RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 C1GALT1C1Q96EU7 318 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 NIFKQ9BYG3 293 aaKnown RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 ASF1AQ9Y294 204 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 DISP2A7MBM2 1401 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 H0Y858 1186 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 PLOD3O60568 738 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 SLC25A14O95258 325 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 AMHP03971 560 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 RPL4P36578 427 aaKnown RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 AQP4P55087 323 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 CLCQ05315 142 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 REP15Q6BDI9 236 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 DCBLD1Q8N8Z6 715 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 SPATA22Q8NHS9 363 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 LRTOMTQ8WZ04 291 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 HTRA1Q92743 480 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 S100A13Q99584 98 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 HMX1Q9NP08 348 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 IFT80Q9P2H3 777 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 NCKAP1Q9Y2A7 1128 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 OR6C75A6NL08 312 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 C9JVG2 144 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 HIST1H2ABP04908 130 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 L1CAMP32004 1257 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 PARP15Q460N3 678 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 CERS6Q6ZMG9 384 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 HIST3H2AQ7L7L0 130 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 FAM220AQ7Z4H9 259 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 DENND6AQ8IWF6 608 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 GPR152Q8TDT2 470 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 STYXQ8WUJ0 223 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 C10orf82Q8WW14 230 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 HIST1H2ACQ93077 130 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 ZNF558Q96NG5 402 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 AARSD1Q9BTE6 412 aaKnown RBP13.06□□□□□ -0.32
LCA5-202ENST00000392959 ZFYVE1Q9HBF4 777 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 APOBEC3GQ9HC16 384 aaKnown RBP13.06□□□□□ -0.32
LCA5-202ENST00000392959 TMEM39AQ9NV64 488 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 COMMD9Q9P000 198 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 ZNF222Q9UK12 451 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 SH3GLB1Q9Y371 365 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 NID2Q14112 1375 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.06□□□□□ -0.32
LCA5-202ENST00000392959 GPR25O00155 361 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 SLC28A2O43868 658 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 LGR5O75473 907 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 TCEA3O75764 348 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 TMEM63AO94886 807 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 CCNYL3P0C7X3 344 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 RHOQP17081 205 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 ACLYP53396 1101 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 GDF10P55107 478 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 TARBP2Q15633 366 aaKnown RBP13.06□□□□□ -0.32
LCA5-202ENST00000392959 ESRP1Q6NXG1 681 aaKnown RBP13.06□□□□□ -0.32
LCA5-202ENST00000392959 CCDC185Q8N715 623 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 FAM156AQ8NDB6 213 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 OR6K2Q8NGY2 324 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 PCDH19Q8TAB3 1148 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 SPPL2BQ8TCT7 592 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 EBF3Q9H4W6 596 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 IPPKQ9H8X2 491 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 ING3Q9NXR8 418 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 PTTG2Q9NZH5 202 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 DGKBQ9Y6T7 804 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 MANFP55145 182 aaKnown RBP13.06□□□□□ -0.32
LCA5-202ENST00000392959 ACTR3P61158 418 aa13.06□□□□□ -0.32
LCA5-202ENST00000392959 BNC1Q01954 994 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms