RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 GSDMBQ8TAX9 411 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 C12orf43Q96C57 262 aaKnown RBP18.95■□□□□ 0.62
CCDC50-202ENST00000392456 SIGLEC10Q96LC7 697 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 TMEM120AQ9BXJ8 343 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 SLC46A2Q9BY10 475 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 MROQ9BYG7 248 aa18.95■□□□□ 0.62
CCDC50-202ENST00000392456 MOV10Q9HCE1 1003 aaKnown RBP18.95■□□□□ 0.62
CCDC50-202ENST00000392456 SMG5Q9UPR3 1016 aaKnown RBP18.95■□□□□ 0.62
CCDC50-202ENST00000392456 CAPN14A8MX76 684 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 MYO1DO94832 1006 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 NDST2P52849 883 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 NTHL1P78549 312 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 C5orf22Q49AR2 442 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 ADGRF1Q5T601 910 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 APOL2Q9BQE5 337 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 HOXD1Q9GZZ0 328 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 ARMCX1Q9P291 453 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 RWDD3Q9Y3V2 267 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 CORINQ9Y5Q5 1042 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 TTC24A2A3L6 582 aaPredicted RBP18.94■□□□□ 0.62
CCDC50-202ENST00000392456 CCDC85CA6NKD9 419 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 MT-CYBP00156 380 aaPredicted RBP18.94■□□□□ 0.62
CCDC50-202ENST00000392456 HLA-DQB2P05538 268 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 CKMP06732 381 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 ABHD2P08910 425 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 RPA3P35244 121 aaPredicted RBP18.94■□□□□ 0.62
CCDC50-202ENST00000392456 UBE3AQ05086 875 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 RALGPS2Q86X27 583 aaPredicted RBP18.94■□□□□ 0.62
CCDC50-202ENST00000392456 MRPS31Q92665 395 aaKnown RBP18.94■□□□□ 0.62
CCDC50-202ENST00000392456 ZNF486Q96H40 463 aaPredicted RBP18.94■□□□□ 0.62
CCDC50-202ENST00000392456 IL12RB2Q99665 862 aa18.94■□□□□ 0.62
CCDC50-202ENST00000392456 RBM22Q9NW64 420 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCDC50-202ENST00000392456 DNMT3BQ9UBC3 853 aaKnown RBP18.94■□□□□ 0.62
CCDC50-202ENST00000392456 MTSS1O43312 755 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 RAMP2O60895 175 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 SESN2P58004 480 aaPredicted RBP18.93■□□□□ 0.62
CCDC50-202ENST00000392456 CTBSQ01459 385 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 SLC10A7Q0GE19 358 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 GPM6BQ13491 265 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 POLD3Q15054 466 aaPredicted RBP18.93■□□□□ 0.62
CCDC50-202ENST00000392456 INSCQ1MX18 579 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 KCTD11Q693B1 232 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 ZNF354CQ86Y25 554 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 OR7D4Q8NG98 312 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 JADE3Q92613 823 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 PABPC5Q96DU9 382 aaKnown RBP18.93■□□□□ 0.62
CCDC50-202ENST00000392456 TRABDQ9H4I3 376 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 KCNN3Q9UGI6 736 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 TRHDEQ9UKU6 1024 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 BPTFQ12830 3046 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 TMX2-CTNND1H3BSU7 103 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 MOSPD3O75425 235 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 KRT6AP02538 564 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 KRT6BP04259 564 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 RB1P06400 928 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 ENO1P06733 434 aaKnown RBP18.93■□□□□ 0.62
CCDC50-202ENST00000392456 C8BP07358 591 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 ZNF33AQ06730 810 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 PALM2Q8IXS6 379 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 OR52K1Q8NGK4 314 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 PBX4Q9BYU1 374 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 SLC2A11Q9BYW1 496 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 NMUR2Q9GZQ4 415 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 ASAH2Q9NR71 780 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 CCL26Q9Y258 94 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 SPEF1Q9Y4P9 236 aa18.93■□□□□ 0.62
CCDC50-202ENST00000392456 MTCL1Q9Y4B5 1905 aaKnown RBP18.93■□□□□ 0.62
CCDC50-202ENST00000392456 EXOC1LA0A1B0GW35 172 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 ILVBLA1L0T0 632 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 GJB3O75712 270 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 MAXP61244 160 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 ITGADQ13349 1161 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 IHHQ14623 411 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 LURAP1LQ8IV03 231 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 CFAP36Q96G28 342 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 UQCC2Q9BRT2 126 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 CAAP1Q9H8G2 361 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 HCFC2Q9Y5Z7 792 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 SNTNA6NMZ2 147 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 POC1B-GALNT4F8VUJ3 575 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 GMNNO75496 209 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 GLDCP23378 1020 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 TPTEP56180 551 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 ERVK-21P61565 698 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 GALNT1Q10472 559 aaPredicted RBP18.92■□□□□ 0.62
CCDC50-202ENST00000392456 SERINC3Q13530 473 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 PRPF39Q86UA1 669 aaKnown RBP18.92■□□□□ 0.62
CCDC50-202ENST00000392456 TDRPQ86YL5 185 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 NOTCH4Q99466 2003 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 VAT1Q99536 393 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 EPS15L1Q9UBC2 864 aa18.92■□□□□ 0.62
CCDC50-202ENST00000392456 TNRC18O15417 2968 aaPredicted RBP18.91■□□□□ 0.62
CCDC50-202ENST00000392456 DENND4CQ5VZ89 1909 aa18.91■□□□□ 0.62
CCDC50-202ENST00000392456 EPOPA6NHQ4 379 aa18.91■□□□□ 0.62
CCDC50-202ENST00000392456 IL32P24001 234 aa18.91■□□□□ 0.62
CCDC50-202ENST00000392456 MGAT1P26572 445 aa18.91■□□□□ 0.62
CCDC50-202ENST00000392456 Q6ZNB5 142 aa18.91■□□□□ 0.62
CCDC50-202ENST00000392456 FRA10AC1Q70Z53 315 aa18.91■□□□□ 0.62
CCDC50-202ENST00000392456 DCP2Q8IU60 420 aaKnown RBP18.91■□□□□ 0.62
CCDC50-202ENST00000392456 SLC15A4Q8N697 577 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms