RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 KLHL7Q8IXQ5 586 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 TAB3Q8N5C8 712 aaPredicted RBP6.72□□□□□ -1.33
UBBP1-201ENST00000392399 NAT8LQ8N9F0 302 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 BBOF1Q8ND07 529 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 OR4K2Q8NGD2 314 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 ZNF398Q8TD17 642 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 CPT1BQ92523 772 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 KRT12Q99456 494 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 RTKNQ9BST9 563 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 SPATA16Q9BXB7 569 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 SLC13A1Q9BZW2 595 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 RMI1Q9H9A7 625 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 TRIM39Q9HCM9 518 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 XAB2Q9HCS7 855 aaKnown RBP6.72□□□□□ -1.33
UBBP1-201ENST00000392399 IL26Q9NPH9 171 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 RXFP3Q9NSD7 469 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 NLE1Q9NVX2 485 aaPredicted RBP6.72□□□□□ -1.33
UBBP1-201ENST00000392399 DNAJC28Q9NX36 388 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 VPS18Q9P253 973 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 KLQ9UEF7 1012 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 ASIC3Q9UHC3 531 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 RABGEF1Q9UJ41 708 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
UBBP1-201ENST00000392399 OR1A2Q9Y585 309 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 ARL5AQ9Y689 179 aa6.72□□□□□ -1.33
UBBP1-201ENST00000392399 SPTBN4Q9H254 2564 aa6.71□□□□□ -1.33
UBBP1-201ENST00000392399 PLXNA2O75051 1894 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TMEM202A6NGA9 273 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SDR42E2A6NKP2 422 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 AGAP14A8MT82 685 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 EFCAB8A8MWE9 144 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TPP1O14773 563 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TM4SF5O14894 197 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 FLRT2O43155 660 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TTI1O43156 1089 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 VEGFDO43915 354 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 PIAS2O75928 621 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SRP72O76094 671 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SLC25A14O95258 325 aaPredicted RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 CEACAM5P06731 702 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 IVLP07476 585 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ALPPL2P10696 532 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 CD59P13987 128 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 CTSEP14091 401 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 JUNDP17535 347 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 CSRP1P21291 193 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 DGKAP23743 735 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 IVDP26440 423 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 EPHA8P29322 1005 aaPredicted RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 PPARGP37231 505 aaPredicted RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 GRIA1P42261 906 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 GRK6P43250 576 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ZNF140P52738 457 aaPredicted RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 DRG2P55039 364 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ACVR1Q04771 509 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 BNIP3Q12983 259 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 EIF2B5Q13144 721 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 CBLBQ13191 982 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 POU6F1Q14863 301 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 MORF4L2Q15014 288 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ELOCQ15369 112 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ATP13A5Q4VNC0 1218 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 LDLRAP1Q5SW96 308 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 PRAMEF14Q5SWL7 426 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 RNASEH2BQ5TBB1 312 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 LVRNQ6Q4G3 990 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 THSD4Q6ZMP0 1018 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SNX20Q7Z614 316 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 PHYKPLQ8IUZ5 450 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 PELI3Q8N2H9 469 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 FSTL5Q8N475 847 aaPredicted RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 CEP112Q8N8E3 955 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 PPHLN1Q8NEY8 458 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 OR13C4Q8NGS5 318 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SAP25Q8TEE9 199 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 HEXDCQ8WVB3 486 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SCG3Q8WXD2 468 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 GLYATL1Q969I3 302 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ULK4Q96C45 1275 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SCARF2Q96GP6 870 aaPredicted RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 CDKN2AIPNLQ96HQ2 116 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SGSM3Q96HU1 749 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ZNF514Q96K75 400 aaPredicted RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TTC25Q96NG3 672 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 AGAP2Q99490 1192 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TTC1Q99614 292 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ERP44Q9BS26 406 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 DUSP23Q9BVJ7 150 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 KIFC1Q9BW19 673 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 LGR4Q9BXB1 951 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ZCCHC2Q9C0B9 1178 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 RAB17Q9H0T7 212 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SLC32A1Q9H598 525 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 ASB8Q9H765 288 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 MRM3Q9HC36 420 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 BPIFA1Q9NP55 256 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 FSCN3Q9NQT6 498 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SMOXQ9NWM0 555 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TRNAU1APQ9NX07 287 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 DLL3Q9NYJ7 618 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms