RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 DAB2IPQ5VWQ8 1189 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 ZNF280DQ6N043 979 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 KRBA2Q6ZNG9 492 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 AACSQ86V21 672 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 NRROSQ86YC3 692 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 PELI3Q8N2H9 469 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 PCDH20Q8N6Y1 951 aaKnown RBP3.12□□□□□ -1.91
PTPRC-205ENST00000391970 OR2AK2Q8NG84 335 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 OR14A16Q8NHC5 309 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 WFIKKN2Q8TEU8 576 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 RND1Q92730 232 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 APBB2Q92870 758 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 RHBDF1Q96CC6 855 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 ORAI1Q96D31 301 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 CEP295NLQ96MC4 621 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 NUDCD1Q96RS6 583 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 KXD1Q9BQD3 176 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 SLC25A33Q9BSK2 321 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 SF3B5Q9BWJ5 86 aaKnown RBP3.12□□□□□ -1.91
PTPRC-205ENST00000391970 MRPL1Q9BYD6 325 aaKnown RBP3.12□□□□□ -1.91
PTPRC-205ENST00000391970 OSGEPL1Q9H4B0 414 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 HIF1ANQ9NWT6 349 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 ARHGEF38Q9NXL2 777 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 CPSF2Q9P2I0 782 aaKnown RBP3.12□□□□□ -1.91
PTPRC-205ENST00000391970 NFKBIL1Q9UBC1 381 aaPredicted RBP3.12□□□□□ -1.91
PTPRC-205ENST00000391970 STK39Q9UEW8 545 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 PLAGL1Q9UM63 463 aa3.12□□□□□ -1.91
PTPRC-205ENST00000391970 MAGED1Q9Y5V3 778 aaPredicted RBP3.12□□□□□ -1.91
PTPRC-205ENST00000391970 ATXN2Q99700 1313 aaKnown RBP3.12□□□□□ -1.91
PTPRC-205ENST00000391970 LOC100509620A0A075B734 347 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 LOC102723996A0A087X1L8 192 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 A0A0U1RQJ8 604 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 hDV102S1A0JD36 115 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 LINC01553A4QN01 128 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GOLGA6L9A6NEM1 432 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 EIF4E1BA6NMX2 242 aaKnown RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 SOCS6O14544 535 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 SPINT2O43291 252 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 AVILO75366 819 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 SERPINI2O75830 405 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GAGE7O76087 117 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 HOXC6P09630 235 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GAGE12FP0CL80 117 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GAGE12GP0CL81 117 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GAGE12IP0CL82 117 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 IGHV4-30-4P0DP06 118 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 RRM1P23921 792 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 BDKRB2P30411 391 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 APOBEC1P41238 236 aaKnown RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 MMP14P50281 582 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 SEC61BP60468 96 aaKnown RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 BNC1Q01954 994 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 DSC1Q08554 894 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GRSF1Q12849 480 aaKnown RBP eCLIP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 CDC16Q13042 620 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GAGE1Q13065 139 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GAGE4Q13068 117 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 MAD2L1Q13257 205 aaPredicted RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GRAPQ13588 217 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 TNFAIP1Q13829 316 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 RASA2Q15283 850 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 DLG2Q15700 870 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 CTF1Q16619 201 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 DECR1Q16698 335 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 TMEM266Q2M3C6 531 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 DCST1Q5T197 706 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 NSUN5P2Q63ZY6 315 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 LCN10Q6JVE6 187 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 RPUSD3Q6P087 351 aaKnown RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 DUS1LQ6P1R4 473 aaKnown RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 PDXDC1Q6P996 788 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 CHERPQ8IWX8 916 aaKnown RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 TMTC2Q8N394 836 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 MINDY1Q8N5J2 469 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 SYT2Q8N9I0 419 aaPredicted RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 CCDC191Q8NCU4 936 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 HM13Q8TCT9 377 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 FAM216AQ8WUB2 273 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 NSMCE1Q8WV22 266 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 TAAR8Q969N4 342 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 ZNF622Q969S3 477 aaKnown RBP eCLIP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 VOPP1Q96AW1 172 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 PKNOX2Q96KN3 472 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 CAMK1GQ96NX5 476 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 DACH2Q96NX9 599 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 GCNAQ96QF7 691 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 APOL6Q9BWW8 343 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 KLHL4Q9C0H6 718 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 SIL1Q9H173 461 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 NOX4Q9NPH5 578 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 PSD3Q9NYI0 1048 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 RNF7Q9UBF6 113 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 DNAJB4Q9UDY4 337 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 MYO6Q9UM54 1294 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 ZNF711Q9Y462 761 aa3.11□□□□□ -1.91
PTPRC-205ENST00000391970 TMEM184BQ9Y519 407 aaPredicted RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.11□□□□□ -1.91
PTPRC-205ENST00000391970 TMEM8BA6NDV4 472 aa3.1□□□□□ -1.91
PTPRC-205ENST00000391970 CD8B2A6NJW9 211 aa3.1□□□□□ -1.91
PTPRC-205ENST00000391970 FAM90A26D6RGX4 464 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms