RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 TARDBPQ13148 414 aaKnown RBP eCLIP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ITGADQ13349 1161 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PLD1Q13393 1074 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 APOFQ13790 326 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TFDP1Q14186 410 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 SELPLGQ14242 412 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 FLOT2Q14254 428 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 CLCA4Q14CN2 919 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 OXA1LQ15070 435 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 CDK10Q15131 360 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TRIP10Q15642 601 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PTPN21Q16825 1174 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 DUSP7Q16829 419 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TYSND1Q2T9J0 566 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PLEKHG6Q3KR16 790 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 USP41Q3LFD5 358 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ZFP69Q49AA0 526 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 DUSP28Q4G0W2 176 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 AASDHQ4L235 1098 aaPredicted RBP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TAF1BQ53T94 588 aaPredicted RBP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PLEKHG4Q58EX7 1191 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ACSBG2Q5FVE4 666 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ZNF484Q5JVG2 852 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 EFHC1Q5JVL4 640 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PPM1LQ5SGD2 360 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 AADACL4Q5VUY2 407 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 GARNL3Q5VVW2 1013 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 MFSD14CQ5VZR4 134 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ATG16L1Q676U5 607 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 OR7E24Q6IFN5 339 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 MFSD5Q6N075 450 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ZNF544Q6NX49 715 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TAPT1Q6NXT6 567 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TTC27Q6P3X3 843 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 FAM171BQ6P995 826 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 CNKSR3Q6P9H4 555 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 DCLRE1AQ6PJP8 1040 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 UGT2A3Q6UWM9 527 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 MAMDC4Q6UXC1 1216 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 LRRC55Q6ZSA7 311 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 LINC00299Q6ZSB3 139 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 USP51Q70EK9 711 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ZNF767PQ75MW2 155 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TRMT10CQ7L0Y3 403 aaKnown RBP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PLPPR4Q7Z2D5 763 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ZNF720Q7Z2F6 126 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 FRMD5Q7Z6J6 570 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 USP37Q86T82 979 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 DNAAF5Q86Y56 855 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ECHDC2Q86YB7 292 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 MIB1Q86YT6 1006 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TMPRSS6Q8IU80 811 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 RHPN2Q8IUC4 686 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 GALNT13Q8IUC8 556 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 NUDCD3Q8IVD9 361 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 NKAIN4Q8IVV8 208 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ZBTB8OSQ8IWT0 167 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 MRPL41Q8IXM3 137 aaKnown RBP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 KLHL7Q8IXQ5 586 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 SYTL1Q8IYJ3 562 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 LINC00518Q8N0U6 118 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 LRRC71Q8N4P6 559 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 METTL13Q8N6R0 699 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 FAM169BQ8N8A8 192 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ANKRD42Q8N9B4 389 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ZNF565Q8N9K5 539 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TSPAN14Q8NG11 270 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 OR8H1Q8NGG4 311 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 OR2W6PQ8NHA6 318 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 ZFP28Q8NHY6 868 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PPTC7Q8NI37 304 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 FBXO30Q8TB52 745 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 HM13Q8TCT9 377 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 MGARPQ8TDB4 240 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 MCOLN3Q8TDD5 553 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 GDPD5Q8WTR4 605 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 FAM172AQ8WUF8 416 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PSPC1Q8WXF1 523 aaKnown RBP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 KRT35Q92764 455 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 COPS5Q92905 334 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 FATE1Q969F0 183 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 C18orf8Q96DM3 657 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 EEF2KMTQ96G04 330 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 NSL1Q96IY1 281 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 CAPNS2Q96L46 248 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 QKIQ96PU8 341 aaKnown RBP eCLIP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 RANBP9Q96S59 729 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 FIZ1Q96SL8 496 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 CYTH2Q99418 400 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PSMB7Q99436 277 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 SLC29A1Q99808 456 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 WACQ9BTA9 647 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 TMEM109Q9BVC6 243 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 KATNAL1Q9BW62 490 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 CINPQ9BW66 212 aaPredicted RBP2.63□□□□□ -1.99
TRAV41-201ENST00000390468 CCDC106Q9BWC9 280 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 CHID1Q9BWS9 393 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 AP1M1Q9BXS5 423 aa2.63□□□□□ -1.99
TRAV41-201ENST00000390468 PACSIN1Q9BY11 444 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms