RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 IQCF5A8MTL0 148 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 EDF1O60869 148 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 KLHL2O95198 593 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 APODP05090 189 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 FDXRP22570 491 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 XPAP23025 273 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 SPAM1P38567 509 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 TTPAP49638 278 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 NFATC2Q13469 925 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 ARHGEF7Q14155 803 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 DBN1Q16643 649 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 CCDC153Q494R4 210 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 CTSL3PQ5NE16 218 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 OTOAQ7RTW8 1153 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 HSD11B1LQ7Z5J1 315 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 TBC1D1Q86TI0 1168 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 FSTL5Q8N475 847 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 PIP4K2CQ8TBX8 421 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 CSGALNACT1Q8TDX6 532 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 OR8D1Q8WZ84 308 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 EZH1Q92800 747 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 ARRDC3Q96B67 414 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 MOCOSQ96EN8 888 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 TSPAN17Q96FV3 270 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 TCF12Q99081 682 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 LIMD1Q9UGP4 676 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 TMEM265A0A087WTH1 108 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 A0A087X1B8 175 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 A0A1W2PQ67 120 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 TSPAN11A1L157 253 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 G3V2L1 256 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 NIPSNAP2O75323 286 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 RHOBTB1O94844 696 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 IL1BP01584 269 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 PRNPP04156 253 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 FGF3P11487 239 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 CPA3P15088 417 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 VIPR1P32241 457 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 EIF2DP41214 584 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 BST1Q10588 318 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 SKIV2LQ15477 1246 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 SETMARQ53H47 684 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 IER5LQ5T953 404 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 LRRC8EQ6NSJ5 796 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 SNX20Q7Z614 316 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 MMAAQ8IVH4 418 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 ZNF398Q8TD17 642 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 MAGEC3Q8TD91 643 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 SGF29Q96ES7 293 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 LRIG1Q96JA1 1093 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 TSNARE1Q96NA8 513 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 SLC30A3Q99726 388 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 TSSK1BQ9BXA7 367 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 C20orf27Q9GZN8 174 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 NSRP1Q9H0G5 558 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 CCDC68Q9H2F9 335 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 PRSS16Q9NQE7 514 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 XPR1Q9UBH6 696 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 APPL1Q9UKG1 709 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 PPM1HQ9ULR3 514 aa12.12□□□□□ -0.47
SPTBN1-203ENST00000389980 K7EQS6 105 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 BIRC5O15392 142 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 SNX3O60493 162 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 WISP3O95389 354 aaPredicted RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 CYP2A6P11509 494 aaPredicted RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ITGALP20701 1170 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 TIE1P35590 1138 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ETV3P41162 512 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 SPINT3P49223 89 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 RALGDSQ12967 914 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ELAVL3Q14576 367 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ATP13A5Q4VNC0 1218 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 Q6ZVL8 140 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 CHPFQ8IZ52 775 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 CLDN19Q8N6F1 224 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 KDM1BQ8NB78 822 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 SCAMP4Q969E2 229 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 UBXN10Q96LJ8 280 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 GPR21Q99679 349 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 P2RY13Q9BPV8 354 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 WRAP53Q9BUR4 548 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 DKK3Q9UBP4 350 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 CRLS1Q9UJA2 301 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 PRSS21Q9Y6M0 314 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 HGSO14964 777 aaPredicted RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 SPINT1O43278 529 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ITM2AO43736 263 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ASGR2P07307 311 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 LTA4HP09960 611 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 COL6A2P12110 1019 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 PKMP14618 531 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 PSMD8P48556 350 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ITGA9Q13797 1035 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 AARS2Q5JTZ9 985 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 PAQR3Q6TCH7 311 aa12.11□□□□□ -0.47
SPTBN1-203ENST00000389980 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms