RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 GOLGA8NF8WBI6 632 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 EIF3FO00303 357 aaPredicted RBP13.48□□□□□ -0.25
SEC13-203ENST00000383801 FCHO1O14526 889 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 KERAO60938 352 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 RASSF9O75901 435 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 CLDN7O95471 211 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 PRAMEF1O95521 474 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ALPIP09923 528 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 T-ENOLP0DO92 83 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 NQO1P15559 274 aaKnown RBP13.48□□□□□ -0.25
SEC13-203ENST00000383801 AOC1P19801 751 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 GMPRP36959 345 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 IDH3AP50213 366 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 SATB1Q01826 763 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 SH2D4BQ5SQS7 431 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 SEL1L3Q68CR1 1132 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 TMC5Q6UXY8 1006 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 TAS2R42Q7RTR8 314 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ZNF781Q8N8C0 355 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 OR6K2Q8NGY2 324 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ING5Q8WYH8 240 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 FGF13Q92913 245 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 FAM83CQ9BQN1 747 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 CLPBQ9H078 707 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 MMADHCQ9H3L0 296 aaPredicted RBP13.48□□□□□ -0.25
SEC13-203ENST00000383801 POMKQ9H5K3 350 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 BRD9Q9H8M2 597 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 COG4Q9H9E3 785 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 BPIFA1Q9NP55 256 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 IL26Q9NPH9 171 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 PNPOQ9NVS9 261 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 PKD2L2Q9NZM6 624 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 MED16Q9Y2X0 877 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 CAPN14A8MX76 684 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 STX16-NPEPL1H3BU86 382 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 STX16O14662 325 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 KLK8O60259 260 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 SLC4A1P02730 911 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 BPIP17213 487 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ACRV1P26436 265 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ARRB2P32121 409 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 EIF2DP41214 584 aaKnown RBP13.48□□□□□ -0.25
SEC13-203ENST00000383801 NSG1P42857 185 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 DCDC1P59894 354 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 HERVK_113P63132 956 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 IRX1P78414 480 aaPredicted RBP13.48□□□□□ -0.25
SEC13-203ENST00000383801 TUBB3Q13509 450 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 RIPK1Q13546 671 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ARHGEF7Q14155 803 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 GEN1Q17RS7 908 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 SETMARQ53H47 684 aaPredicted RBP13.48□□□□□ -0.25
SEC13-203ENST00000383801 FAM78AQ5JUQ0 283 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 TMEM215Q68D42 235 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 PAQR3Q6TCH7 311 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 MACC1Q6ZN28 852 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 SERPINA9Q86WD7 417 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 CHCHD4Q8N4Q1 142 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 TXNDC5Q8NBS9 432 aaKnown RBP13.48□□□□□ -0.25
SEC13-203ENST00000383801 ATOH8Q96SQ7 321 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 CCDC106Q9BWC9 280 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 C1QTNF3Q9BXJ4 246 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ERVK-6Q9BXR3 956 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 C1orf21Q9H246 121 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ZDHHC6Q9H6R6 413 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ALG9Q9H6U8 611 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 ELOVL2Q9NXB9 296 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 DEC1Q9P2X7 70 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 MARCOQ9UEW3 520 aaPredicted RBP13.48□□□□□ -0.25
SEC13-203ENST00000383801 MYOFQ9NZM1 2061 aa13.48□□□□□ -0.25
SEC13-203ENST00000383801 SCN8AQ9UQD0 1980 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 PSMD11O00231 422 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 GAPDHSO14556 408 aaPredicted RBP13.47□□□□□ -0.25
SEC13-203ENST00000383801 ZBTB14O43829 449 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 TULP3O75386 442 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 FGF4P08620 206 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 ESRRAP11474 423 aaPredicted RBP13.47□□□□□ -0.25
SEC13-203ENST00000383801 CHRM3P20309 590 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 SP100P23497 879 aaPredicted RBP13.47□□□□□ -0.25
SEC13-203ENST00000383801 PRDX6P30041 224 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 RGS4P49798 205 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 PTSQ03393 145 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 FCHO2Q0JRZ9 810 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 ZNF805Q5CZA5 627 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 CTSL3PQ5NE16 218 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 ZNF678Q5SXM1 525 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 METTL2BQ6P1Q9 378 aaKnown RBP13.47□□□□□ -0.25
SEC13-203ENST00000383801 ATG14Q6ZNE5 492 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 FRMD7Q6ZUT3 714 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 NUDT18Q6ZVK8 323 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 Q6ZVU0 165 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 ACAD11Q709F0 780 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 ZSWIM9Q86XI8 627 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 LSMEM2Q8N112 164 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 SPATA6LQ8N4H0 392 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 TMIEQ8NEW7 156 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 SLC7A6OSQ96CW6 309 aaPredicted RBP13.47□□□□□ -0.25
SEC13-203ENST00000383801 PTCD3Q96EY7 689 aaKnown RBP13.47□□□□□ -0.25
SEC13-203ENST00000383801 KLHL32Q96NJ5 620 aa13.47□□□□□ -0.25
SEC13-203ENST00000383801 LRRC3BQ96PB8 259 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms