RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CRYL1Q9Y2S2 319 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 H0YJX3 145 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 ALDH2P05091 517 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 MYL3P08590 195 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 NPR3P17342 541 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 CAPN3P20807 821 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 NOS2P35228 1153 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 CPT1AP50416 773 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 PURAQ00577 322 aaKnown RBP13.8□□□□□ -0.2
SDC1-202ENST00000381150 YWHAHQ04917 246 aaPredicted RBP13.8□□□□□ -0.2
SDC1-202ENST00000381150 GRB7Q14451 532 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 CST9Q5W186 159 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 ANKRD34AQ69YU3 496 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 TMEM135Q86UB9 458 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 TERB1Q8NA31 727 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 POC5Q8NA72 575 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 FBXO30Q8TB52 745 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 RDH11Q8TC12 318 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 GPR22Q99680 433 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 FSD1LQ9BXM9 530 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 ZNF385DQ9H6B1 395 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 CRTAC1Q9NQ79 661 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 TMEM30AQ9NV96 361 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.8□□□□□ -0.2
SDC1-202ENST00000381150 SLAMF8Q9P0V8 285 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 ITGB1BP2Q9UKP3 347 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 TIMM22Q9Y584 194 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 C17orf102A2RUQ5 167 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 SOBPA7XYQ1 873 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 HACD1B0YJ81 288 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 DEAF1O75398 565 aaPredicted RBP13.79□□□□□ -0.2
SDC1-202ENST00000381150 CELF2O95319 508 aaKnown RBP13.79□□□□□ -0.2
SDC1-202ENST00000381150 AGXTP21549 392 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 PRKACGP22612 351 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 CHRNA4P43681 627 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 LIPEQ05469 1076 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 INAVAQ3KP66 663 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 ZNF789Q5FWF6 425 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 C2orf69Q8N8R5 385 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 TRPV3Q8NET8 790 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 C19orf60Q96EN9 201 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 MED10Q9BTT4 135 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 FICDQ9BVA6 458 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 ALG2Q9H553 416 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 LRRC4Q9HBW1 653 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 AGPAT4Q9NRZ5 378 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 CMTM6Q9NX76 183 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 CD300AQ9UGN4 299 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 XPNPEP2O43895 674 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 INHBBP09529 407 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 SLC1A2P43004 574 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 DIO3P55073 304 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 TRIM32Q13049 653 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 AQP6Q13520 282 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 PHKG1Q16816 387 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 FUNDC1Q8IVP5 155 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 OR10Q1Q8NGQ4 319 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 A8MT66 165 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 IPO13O94829 963 aaKnown RBP13.79□□□□□ -0.2
SDC1-202ENST00000381150 CHEK2O96017 543 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 MBL2P11226 248 aaPredicted RBP13.79□□□□□ -0.2
SDC1-202ENST00000381150 CYP4B1P13584 511 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 FSHRP23945 695 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 HLCSP50747 726 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 COPZ1P61923 177 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 RSBN1Q5VWQ0 802 aaPredicted RBP13.79□□□□□ -0.2
SDC1-202ENST00000381150 FRA10AC1Q70Z53 315 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 TMEM151AQ8N4L1 468 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 EDEM1Q92611 657 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 ZNF347Q96SE7 839 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 SLX1AQ9BQ83 275 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 MLPHQ9BV36 600 aaPredicted RBP13.79□□□□□ -0.2
SDC1-202ENST00000381150 C1QTNF1Q9BXJ1 281 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 PRM3Q9NNZ6 103 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 PIGVQ9NUD9 493 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 MIOSQ9NXC5 875 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 PCDHGA3Q9Y5H0 932 aa13.79□□□□□ -0.2
SDC1-202ENST00000381150 SLC22A2O15244 555 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 TBX1O43435 398 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 ALDOCP09972 364 aaKnown RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 GFAPP14136 432 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 GLUD2P49448 558 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 GSK3BP49841 420 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 MRPS15P82914 257 aaKnown RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 IL5RAQ01344 420 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 CDH17Q12864 832 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 GPR158Q5T848 1215 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 DEPDC1Q5TB30 811 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 ZNF773Q6PK81 442 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 SPESP1Q6UW49 350 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 MFSD6LQ8IWD5 586 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 ADGRG5Q8IZF4 528 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 C8orf59Q8N0T1 100 aaPredicted RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 MIER2Q8N344 545 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 ZMIZ2Q8NF64 920 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 OR13F1Q8NGS4 319 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 PPM1MQ96MI6 270 aa13.78□□□□□ -0.2
SDC1-202ENST00000381150 C6orf62Q9GZU0 229 aaPredicted RBP13.78□□□□□ -0.2
SDC1-202ENST00000381150 GBA3Q9H227 469 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms