RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 HSD17B1P14061 328 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 SLC6A4P31645 630 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 OXCT1P55809 520 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 FOXM1Q08050 763 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 SMARCB1Q12824 385 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 INPP5AQ14642 412 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 TSNQ15631 228 aaKnown RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 SPATS1Q496A3 300 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 SETMARQ53H47 684 aaPredicted RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 RNF19BQ6ZMZ0 732 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 EP400NLQ6ZTU2 488 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 ERMP1Q7Z2K6 904 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 EFL1Q7Z2Z2 1120 aaKnown RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 SPATA19Q7Z5L4 167 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 CARM1Q86X55 608 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 AQP12AQ8IXF9 295 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 SLC15A3Q8IY34 581 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 ABI1Q8IZP0 508 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 NKAPQ8N5F7 415 aaKnown RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 ANKFN1Q8N957 763 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 GOLM1Q8NBJ4 401 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 CANT1Q8WVQ1 401 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 CDK5RAP1Q96SZ6 601 aaKnown RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 HAUS8Q9BT25 410 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 NUSAP1Q9BXS6 441 aaKnown RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 SEMA4BQ9NPR2 832 aaPredicted RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 TMEM161AQ9NX61 479 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 VPS9D1Q9Y2B5 631 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 MED16Q9Y2X0 877 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 RNF11Q9Y3C5 154 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 ACTL7AQ9Y615 435 aa11.86□□□□□ -0.51
TRIM23-203ENST00000381018 OAS3Q9Y6K5 1087 aaKnown RBP11.86□□□□□ -0.51
TRIM23-203ENST00000381018 MYOCOSA0A1B0GUC4 107 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 CCDC160A6NGH7 325 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 C2orf81A6NN90 581 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 FXYD1O00168 92 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 STX16O14662 325 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 PFDN6O15212 129 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 INSIG1O15503 277 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 HNRNPRO43390 633 aaKnown RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 CA12O43570 354 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 VNN2O95498 520 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 RPS17P08708 135 aaKnown RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 BMP2P12643 396 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 SLC11A2P49281 568 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 SCNN1BP51168 640 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 ACLYP53396 1101 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 CDH4P55283 916 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 PABPC1LQ4VXU2 614 aaKnown RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 LCN8Q6JVE9 175 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 OGFOD2Q6N063 350 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 KLHDC10Q6PID8 442 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 BLOC1S3Q6QNY0 202 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 B3GNT6Q6ZMB0 384 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 ZBTB49Q6ZSB9 765 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 RNF180Q86T96 592 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 GIPC2Q8TF65 315 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 TSPEARQ8WU66 669 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 FUBP1Q96AE4 644 aaKnown RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 LRRC58Q96CX6 371 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 GPR21Q99679 349 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 SLC29A1Q99808 456 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 TMEM79Q9BSE2 394 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 SPON2Q9BUD6 331 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 RBM38Q9H0Z9 239 aaKnown RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 SCUBE2Q9NQ36 999 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 CCM2LQ9NUG4 571 aaPredicted RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 GMPR2Q9P2T1 348 aaKnown RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 IKZF3Q9UKT9 509 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 ZFP37Q9Y6Q3 630 aaPredicted RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 A0A1B0GTL3 188 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 DHRS12A0PJE2 317 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 NPEPPSL1A6NEC2 478 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 SLC38A8A6NNN8 435 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 CDC7O00311 574 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 BTN3A1O00481 513 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 HTRA2O43464 458 aaPredicted RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 KDELR3O43731 214 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 VPS26AO75436 327 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 MLYCDO95822 493 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 CHEK2O96017 543 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 COL6A1P12109 1028 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 SLC6A2P23975 617 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 PSMA3P25788 255 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 ATP5C1P36542 298 aaKnown RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 RGRP47804 291 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 DUSP4Q13115 394 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 CAPRIN1Q14444 709 aaKnown RBP11.85□□□□□ -0.51
TRIM23-203ENST00000381018 CYTH1Q15438 398 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 PTPRNQ16849 979 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 MYLK3Q32MK0 819 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 TBCELQ5QJ74 424 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 KRT80Q6KB66 452 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 PPP4R4Q6NUP7 873 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 BORAQ6PGQ7 559 aa11.85□□□□□ -0.51
TRIM23-203ENST00000381018 TXNDC11Q6PKC3 985 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms