RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 L3MBTL1Q9Y468 752 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 PCDHB1Q9Y5F3 818 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 TRBV5-4A0A0C4DH59 114 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 ALPIP09923 528 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 MYOGP15173 224 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 RPS3P23396 243 aaKnown RBP eCLIP19.12■□□□□ 0.653e-7■□□□□ 10.5
GMDS-201ENST00000380805 SERPINA4P29622 427 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 CCNG1P51959 295 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 SNRPD1P62314 119 aaKnown RBP19.12■□□□□ 0.65
GMDS-201ENST00000380805 TEAD2Q15562 447 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 PDCD2Q16342 344 aaPredicted RBP19.12■□□□□ 0.65
GMDS-201ENST00000380805 FUT11Q495W5 492 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 ARHGAP15Q53QZ3 475 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 ZRANB3Q5FWF4 1079 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 NET1Q7Z628 596 aaPredicted RBP19.12■□□□□ 0.65
GMDS-201ENST00000380805 CBARPQ8N350 705 aaPredicted RBP19.12■□□□□ 0.65
GMDS-201ENST00000380805 CEP70Q8NHQ1 597 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 CD200R1Q8TD46 325 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 ZFYVE1Q9HBF4 777 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 TNFRSF12AQ9NP84 129 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 GTSE1Q9NYZ3 720 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 NOP53Q9NZM5 478 aaKnown RBP19.12■□□□□ 0.65
GMDS-201ENST00000380805 FAM50BQ9Y247 325 aa19.12■□□□□ 0.65
GMDS-201ENST00000380805 NUP210Q8TEM1 1887 aaPredicted RBP19.12■□□□□ 0.65
GMDS-201ENST00000380805 NEMP1O14524 444 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 UBFD1O14562 309 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 GRM6O15303 877 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 OR1I1O60431 355 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 RHOP08100 348 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 FGF4P08620 206 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 CTPS1P17812 591 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 PIK3R1P27986 724 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 PTPN5P54829 565 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 ZNF77Q15935 545 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 TRMT5Q32P41 509 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 ACSBG2Q5FVE4 666 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 PRSS36Q5K4E3 855 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 C22orf39Q6P5X5 142 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 POU5F2Q8N7G0 328 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 PTGR2Q8N8N7 351 aaPredicted RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 OR6K2Q8NGY2 324 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 GIMAP7Q8NHV1 300 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 RP9Q8TA86 221 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.11■□□□□ 0.652e-6■■■■■ 34.1
GMDS-201ENST00000380805 PDLIM5Q96HC4 596 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 LENG8Q96PV6 779 aaPredicted RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 CPEB1Q9BZB8 566 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 TDP1Q9NUW8 608 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 TMCO1Q9UM00 188 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 SLC30A1Q9Y6M5 507 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 MYOFQ9NZM1 2061 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 CHD9Q3L8U1 2897 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 A0A088AWK7 358 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 LINC01553A4QN01 128 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 RGSL1A5PLK6 1076 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 SYCE1LA8MT33 242 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 STX16-NPEPL1H3BU86 382 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 UBXN8O00124 270 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 STX16O14662 325 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 RFPL2O75678 378 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 THRAP10827 490 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 DMC1Q14565 340 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 KPNB1Q14974 876 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 SLC5A9Q2M3M2 681 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 KHDC1Q4VXA5 237 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 PGM2L1Q6PCE3 622 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 RAB44Q7Z6P3 723 aaPredicted RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 TMEM25Q86YD3 366 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 PCDH20Q8N6Y1 951 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 TTC16Q8NEE8 873 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 WDR60Q8WVS4 1066 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 FUBP1Q96AE4 644 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 ZBTB26Q9HCK0 441 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 MARK1Q9P0L2 795 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 NKX1-2Q9UD57 310 aaPredicted RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 SLC7A8Q9UHI5 535 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 TRMT6Q9UJA5 497 aaKnown RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 APPL1Q9UKG1 709 aa19.11■□□□□ 0.65
GMDS-201ENST00000380805 COLQQ9Y215 455 aaPredicted RBP19.11■□□□□ 0.65
GMDS-201ENST00000380805 CHD7Q9P2D1 2997 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 AGAP14A8MT82 685 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 MEI4A8MW99 385 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 PRMT5O14744 637 aaPredicted RBP19.1■□□□□ 0.65
GMDS-201ENST00000380805 NIPSNAP2O75323 286 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 SUPT7LO94864 414 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 GNAZP19086 355 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 HNF1BP35680 557 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 CTSOP43234 321 aaPredicted RBP19.1■□□□□ 0.65
GMDS-201ENST00000380805 CLCN7P51798 805 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 MXRA7P84157 204 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 CAMK1Q14012 370 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 ICE2Q659A1 982 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 ASTLQ6HA08 431 aaPredicted RBP19.1■□□□□ 0.65
GMDS-201ENST00000380805 UGT3A1Q6NUS8 523 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 SNX20Q7Z614 316 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 KIAA0907Q7Z7F0 614 aaPredicted RBP19.1■□□□□ 0.65
GMDS-201ENST00000380805 ZSWIM9Q86XI8 627 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 PLPP6Q8IY26 295 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 OTUB2Q96DC9 234 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms