RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 APPL1Q9UKG1 709 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 RPS6KL1Q9Y6S9 549 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 V9GYY5 206 aaPredicted RBP12.58□□□□□ -0.4
SMN1-202ENST00000380707 EP300Q09472 2414 aaPredicted RBP12.58□□□□□ -0.4
SMN1-202ENST00000380707 A0A1B0GVT2 93 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PROB1E7EW31 1015 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 VILLO15195 856 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 INPP4BO15327 924 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CFIP05156 583 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PYGLP06737 847 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PRSS56P0CW18 603 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PGAM1P18669 254 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ARNTP27540 789 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 TEAD1P28347 426 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 DPP6P42658 865 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CDKN1CP49918 316 aaPredicted RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 YPEL5P62699 121 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 TUBB4BP68371 445 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CDK3Q00526 305 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 BNC1Q01954 994 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 NFATC2Q13469 925 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CUL1Q13616 776 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PDE1CQ14123 709 aaPredicted RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 HLTFQ14527 1009 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMN1-202ENST00000380707 DUOXA1Q1HG43 343 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PDPK2PQ6A1A2 396 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CENPUQ71F23 418 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 TRIM74Q86UV6 250 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ZBED8Q8IZ13 594 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 OR6P1Q8NGX9 317 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CEP76Q8TAP6 659 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 FAM174AQ8TBP5 190 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ZNF398Q8TD17 642 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 LRRC39Q96DD0 335 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 COX14Q96I36 57 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ASB8Q9H765 288 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PLAC1Q9HBJ0 212 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CAPN10Q9HC96 672 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ARFGAP3Q9NP61 516 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 SAYSD1Q9NPB0 183 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 FSCN3Q9NQT6 498 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 GPR27Q9NS67 375 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 NFU1Q9UMS0 254 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CHMP2BQ9UQN3 213 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ANKRD6Q9Y2G4 727 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ZNF106Q9H2Y7 1883 aaKnown RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 ZCWPW2A0A1B0GU75 182 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 TMEM202A6NGA9 273 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 USP1O94782 785 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 VAPBO95292 243 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 GOT2P00505 430 aaKnown RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 POLBP06746 335 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 HOXC4P09017 264 aaPredicted RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 MYCLP1P12525 358 aaPredicted RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 PI4KAP42356 2102 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ARCN1P48444 511 aaKnown RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 OVGP1Q12889 678 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ITGA9Q13797 1035 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 TEAD4Q15561 434 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 SMAD1Q15797 465 aaKnown RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 TRIM61Q5EBN2 209 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 SLC23A3Q6PIS1 610 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 RABEPKQ7Z6M1 372 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 SPATS2Q86XZ4 545 aaKnown RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 PIANPQ8IYJ0 282 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PNPLA1Q8N8W4 532 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 FBXO36Q8NEA4 188 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 BTN2A2Q8WVV5 523 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 GLYATL1Q969I3 302 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ZNF669Q96BR6 464 aaPredicted RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 HIC2Q96JB3 615 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 NAT9Q9BTE0 207 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 FAM129AQ9BZQ8 928 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 FOXP3Q9BZS1 431 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 IL1RAPL1Q9NZN1 696 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 ZC3H7BQ9UGR2 993 aaKnown RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 GMEB2Q9UKD1 530 aa12.57□□□□□ -0.4
SMN1-202ENST00000380707 PNMA8BQ9ULN7 279 aaPredicted RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 OAS3Q9Y6K5 1087 aaKnown RBP12.57□□□□□ -0.4
SMN1-202ENST00000380707 SPEGQ15772 3267 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 SPTY2D1-AS1A0A0U1RR47 76 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 AGAP14A8MT82 685 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 GOLGA8KD6RF30 607 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 GOLGA8TH3BQL2 631 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 CACNB4O00305 520 aaPredicted RBP12.56□□□□□ -0.4
SMN1-202ENST00000380707 TOR1BO14657 336 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 EIF3HO15372 352 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMN1-202ENST00000380707 SLC25A14O95258 325 aaPredicted RBP12.56□□□□□ -0.4
SMN1-202ENST00000380707 FOXN2P32314 431 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 THOP1P52888 689 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 C21orf59P57076 290 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 NXPH1P58417 271 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 KIAA1024LP59773 190 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 PRAMEP78395 509 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 IRX4P78413 519 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 CACNG1Q06432 222 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 FZD2Q14332 565 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 CRYMQ14894 314 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms