RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 A0A1B0GTQ1 180 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 SDR42E2A6NKP2 422 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 RAD51CO43502 376 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 SEC31AO94979 1220 aaKnown RBP11.84□□□□□ -0.51
PCNA-201ENST00000379143 SLC25A14O95258 325 aaPredicted RBP11.84□□□□□ -0.51
PCNA-201ENST00000379143 PSMA3P25788 255 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 DEKP35659 375 aaKnown RBP11.84□□□□□ -0.51
PCNA-201ENST00000379143 CCT8P50990 548 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 LIMK1P53667 647 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 HNRNPKP61978 463 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCNA-201ENST00000379143 PPARDQ03181 441 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 CALCOCO2Q13137 446 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 SUZ12Q15022 739 aaKnown RBP11.84□□□□□ -0.51
PCNA-201ENST00000379143 KCTD19Q17RG1 926 aaPredicted RBP11.84□□□□□ -0.51
PCNA-201ENST00000379143 ENPP7Q6UWV6 458 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 FAM151BQ6UXP7 276 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 CAND1Q86VP6 1230 aaKnown RBP11.84□□□□□ -0.51
PCNA-201ENST00000379143 MMGT1Q8N4V1 131 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 OR13C4Q8NGS5 318 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 GLYATL1Q969I3 302 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 COX14Q96I36 57 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 TBATAQ96M53 351 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 SERPINB12Q96P63 405 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 LGR4Q9BXB1 951 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 SLC13A1Q9BZW2 595 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 MRM3Q9HC36 420 aaKnown RBP11.84□□□□□ -0.51
PCNA-201ENST00000379143 SMOXQ9NWM0 555 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 DNAJC28Q9NX36 388 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 SAMD15Q9P1V8 674 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 VPS18Q9P253 973 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 KLQ9UEF7 1012 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 FNDC3AQ9Y2H6 1198 aaKnown RBP11.84□□□□□ -0.51
PCNA-201ENST00000379143 TCAF1Q9Y4C2 921 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 PCDHGB2Q9Y5G2 931 aa11.84□□□□□ -0.51
PCNA-201ENST00000379143 USP24Q9UPU5 2620 aa11.83□□□□□ -0.51
PCNA-201ENST00000379143 ADAMTS9Q9P2N4 1935 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 FADS2P1A8MWK0 482 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 GPR89AB7ZAQ6 455 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 GOLGA8MH3BSY2 632 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 CDX4O14627 284 aaPredicted RBP11.83□□□□□ -0.52
PCNA-201ENST00000379143 INPP4BO15327 924 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 PCDHGA12O60330 932 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 SRP72O76094 671 aaKnown RBP11.83□□□□□ -0.52
PCNA-201ENST00000379143 RASGRP1O95267 797 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 PRAMEF1O95521 474 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 GPR89BP0CG08 455 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 NME1P15531 152 aaKnown RBP11.83□□□□□ -0.52
PCNA-201ENST00000379143 SDHBP21912 280 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 MGAT1P26572 445 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 MAGEA3P43357 314 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 SRP54P61011 504 aaKnown RBP11.83□□□□□ -0.52
PCNA-201ENST00000379143 TMPRSS15P98073 1019 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 ACVR1Q04771 509 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 GPR33Q49SQ1 333 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 CCDC38Q502W7 563 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 GLE1Q53GS7 698 aaKnown RBP11.83□□□□□ -0.52
PCNA-201ENST00000379143 TSTD2Q5T7W7 516 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 STPG1Q5TH74 334 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 HIBCHQ6NVY1 386 aaPredicted RBP11.83□□□□□ -0.52
PCNA-201ENST00000379143 KDM7AQ6ZMT4 941 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 ZNF398Q8TD17 642 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 NETO1Q8TDF5 533 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 CDKN2AIPNLQ96HQ2 116 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 DNAJC1Q96KC8 554 aaKnown RBP11.83□□□□□ -0.52
PCNA-201ENST00000379143 KIFC1Q9BW19 673 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 TRIM31Q9BZY9 425 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 ZCCHC2Q9C0B9 1178 aaKnown RBP11.83□□□□□ -0.52
PCNA-201ENST00000379143 RMI1Q9H9A7 625 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 CHRAC1Q9NRG0 131 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 TM7SF3Q9NS93 570 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 RXFP3Q9NSD7 469 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 WHRNQ9P202 907 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 FKBPLQ9UIM3 349 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 ANAPC5Q9UJX4 755 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 KCTD3Q9Y597 815 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 SLC30A1Q9Y6M5 507 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 DGKBQ9Y6T7 804 aa11.83□□□□□ -0.52
PCNA-201ENST00000379143 LAMA1P25391 3075 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 TMEM131Q92545 1883 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.82□□□□□ -0.52
PCNA-201ENST00000379143 PRSS38A1L453 326 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 TMEM202A6NGA9 273 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 AGAP14A8MT82 685 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 VEGFDO43915 354 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 GDF9O60383 454 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 AVILO75366 819 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 TNFP01375 233 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 JUNDP17535 347 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 PAMP19021 973 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 ITGALP20701 1170 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 EPHA8P29322 1005 aaPredicted RBP11.82□□□□□ -0.52
PCNA-201ENST00000379143 HK3P52790 923 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 ITGA8P53708 1063 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 DRG2P55039 364 aaKnown RBP11.82□□□□□ -0.52
PCNA-201ENST00000379143 PRAMEP78395 509 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 XIAPP98170 497 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 CAV1Q03135 178 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 EIF2B5Q13144 721 aaKnown RBP11.82□□□□□ -0.52
PCNA-201ENST00000379143 NFATC2Q13469 925 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms