RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 FATE1Q969F0 183 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 VOPP1Q96AW1 172 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 PDXPQ96GD0 296 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 ZNF641Q96N77 438 aaPredicted RBP13.73□□□□□ -0.21
PRPF18-202ENST00000378572 SLC46A1Q96NT5 459 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 TUBGCP5Q96RT8 1024 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 SLC39A8Q9C0K1 460 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 WHRNQ9P202 907 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 ASIC3Q9UHC3 531 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
PRPF18-202ENST00000378572 C5orf60A6NFR6 353 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 B4DGG1 531 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 CCNCP24863 283 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 BCL2L1Q07817 233 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 VAC14Q08AM6 782 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 MTM1Q13496 603 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 TAF8Q7Z7C8 310 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 TP53INP2Q8IXH6 220 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 ZNF843Q8N446 348 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 ATPAF2Q8N5M1 289 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 Q8N9G6 341 aaPredicted RBP13.73□□□□□ -0.21
PRPF18-202ENST00000378572 FAM71DQ8N9W8 422 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 TSEN2Q8NCE0 465 aaKnown RBP13.73□□□□□ -0.21
PRPF18-202ENST00000378572 BBOF1Q8ND07 529 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 HCAR2Q8TDS4 363 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 LRRC45Q96CN5 670 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 FOXP3Q9BZS1 431 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 PDFQ9HBH1 243 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 PAK5Q9P286 719 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 PCDHGA8Q9Y5G5 932 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 ANKRD36A6QL64 1941 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 RP1P56715 2156 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 A0A1W2PNU3 283 aaPredicted RBP13.72□□□□□ -0.21
PRPF18-202ENST00000378572 TSPAN11A1L157 253 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 A8MX80 341 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 STK10O94804 968 aaKnown RBP13.72□□□□□ -0.21
PRPF18-202ENST00000378572 IFNB1P01574 187 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 H2AFXP16104 143 aaPredicted RBP13.72□□□□□ -0.21
PRPF18-202ENST00000378572 RPL21P46778 160 aaKnown RBP13.72□□□□□ -0.21
PRPF18-202ENST00000378572 RGRP47804 291 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 AP1B1Q10567 949 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 ACOX1Q15067 660 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 TIGD7Q6NT04 549 aaPredicted RBP13.72□□□□□ -0.21
PRPF18-202ENST00000378572 CCDC81Q6ZN84 652 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 CCDC13Q8IYE1 715 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 FBXO39Q8N4B4 442 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 GLIS1Q8NBF1 620 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 CCNYQ8ND76 341 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 PDCD6IPQ8WUM4 868 aaKnown RBP13.72□□□□□ -0.21
PRPF18-202ENST00000378572 ANKRD7Q92527 254 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 SNF8Q96H20 258 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 VAT1Q99536 393 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 DPH5Q9H2P9 285 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 C10orf88Q9H8K7 445 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 ARGLU1Q9NWB6 273 aaPredicted RBP13.72□□□□□ -0.21
PRPF18-202ENST00000378572 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
PRPF18-202ENST00000378572 LRRK1Q38SD2 2015 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 KALRNO60229 2985 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 ESYT3A0FGR9 886 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 GOLGA6CA6NDK9 693 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 GOLGA6BA6NDN3 693 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 D6RAR5 112 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 PLD2O14939 933 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 ERLIN1O75477 346 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 SEC31AO94979 1220 aaKnown RBP13.71□□□□□ -0.21
PRPF18-202ENST00000378572 JMJD7P0C870 316 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 GOLGA6DP0CG33 693 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 KELP23276 732 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 RPL22P35268 128 aaKnown RBP13.71□□□□□ -0.21
PRPF18-202ENST00000378572 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.21
PRPF18-202ENST00000378572 SCNN1BP51168 640 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 PDX1P52945 283 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 INHBCP55103 352 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 CCL7P80098 99 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 CAV1Q03135 178 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 ZNF235Q14590 738 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 MAP9Q49MG5 647 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 DENND2CQ68D51 928 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 LVRNQ6Q4G3 990 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 IGF2-ASQ6U949 168 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 B3GNT8Q7Z7M8 397 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 ZSWIM9Q86XI8 627 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 PLA2G15Q8NCC3 412 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 FAM46DQ8NEK8 389 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 SPATA13Q96N96 652 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 GOLGA6AQ9NYA3 693 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 RABGEF1Q9UJ41 708 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 SNX24Q9Y343 169 aa13.71□□□□□ -0.21
PRPF18-202ENST00000378572 COL27A1Q8IZC6 1860 aaPredicted RBP13.71□□□□□ -0.22
PRPF18-202ENST00000378572 CAPN8A6NHC0 703 aa13.7□□□□□ -0.22
PRPF18-202ENST00000378572 TMX2-CTNND1H3BSU7 103 aa13.7□□□□□ -0.22
PRPF18-202ENST00000378572 SMAPO00193 183 aa13.7□□□□□ -0.22
PRPF18-202ENST00000378572 DNALI1O14645 258 aaPredicted RBP13.7□□□□□ -0.22
PRPF18-202ENST00000378572 MAFKO60675 156 aa13.7□□□□□ -0.22
PRPF18-202ENST00000378572 RECQL5O94762 991 aaPredicted RBP13.7□□□□□ -0.22
PRPF18-202ENST00000378572 ITGA2BP08514 1039 aa13.7□□□□□ -0.22
PRPF18-202ENST00000378572 HGFP14210 728 aa13.7□□□□□ -0.22
PRPF18-202ENST00000378572 PLA2G2AP14555 144 aa13.7□□□□□ -0.22
PRPF18-202ENST00000378572 ETS1P14921 441 aa13.7□□□□□ -0.22
PRPF18-202ENST00000378572 ECHS1P30084 290 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms