RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 CST9Q5W186 159 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 NADSYN1Q6IA69 706 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 AFTPHQ6ULP2 937 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 SLC24A5Q71RS6 500 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 EFL1Q7Z2Z2 1120 aaKnown RBP18.1■□□□□ 0.49
TDP2-202ENST00000378198 ARHGAP22Q7Z5H3 698 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 RTN4RL1Q86UN2 441 aaPredicted RBP18.1■□□□□ 0.49
TDP2-202ENST00000378198 SPPL2CQ8IUH8 684 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 TTC9BQ8N6N2 239 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 TFAP2CQ92754 450 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 FAM193BQ96PV7 902 aaPredicted RBP18.1■□□□□ 0.49
TDP2-202ENST00000378198 MGME1Q9BQP7 344 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 NUSAP1Q9BXS6 441 aaKnown RBP18.1■□□□□ 0.49
TDP2-202ENST00000378198 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.1■□□□□ 0.49
TDP2-202ENST00000378198 MUC13Q9H3R2 512 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 SLC52A3Q9NQ40 469 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 COMMD8Q9NX08 183 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 SLC8A2Q9UPR5 921 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 PRG3Q9Y2Y8 225 aaPredicted RBP18.1■□□□□ 0.49
TDP2-202ENST00000378198 GPR45Q9Y5Y3 372 aa18.1■□□□□ 0.49
TDP2-202ENST00000378198 PDLIM1O00151 329 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 STX16O14662 325 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 TMCC1O94876 653 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 MYCNP04198 464 aaPredicted RBP18.09■□□□□ 0.49
TDP2-202ENST00000378198 RPS17P08708 135 aaKnown RBP18.09■□□□□ 0.49
TDP2-202ENST00000378198 ALDH3B2P48448 385 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 RPS6KA3P51812 740 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 ZNF140P52738 457 aaPredicted RBP18.09■□□□□ 0.49
TDP2-202ENST00000378198 C5orf22Q49AR2 442 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 NKAPQ8N5F7 415 aaKnown RBP18.09■□□□□ 0.49
TDP2-202ENST00000378198 KLHDC9Q8NEP7 349 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 MYEOVQ96EZ4 313 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 C1QTNF3Q9BXJ4 246 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 TRIM54Q9BYV2 358 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 MAGEH1Q9H213 219 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 SEMA4BQ9NPR2 832 aaPredicted RBP18.09■□□□□ 0.49
TDP2-202ENST00000378198 ATXN10Q9UBB4 475 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 AURKCQ9UQB9 309 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 BTRCQ9Y297 605 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 PCDHA9Q9Y5H5 950 aa18.09■□□□□ 0.49
TDP2-202ENST00000378198 OR6C75A6NL08 312 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 F5H5T6 163 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 NDUFS3O75489 264 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 ECI2O75521 394 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 SOAT2O75908 522 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 PRR35P0CG20 571 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 FASP25445 335 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 FMO4P31512 558 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 SETMARQ53H47 684 aaPredicted RBP18.08■□□□□ 0.49
TDP2-202ENST00000378198 TXNDC11Q6PKC3 985 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 LGI2Q8N0V4 545 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 RETREG1Q9H6L5 497 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 PFDN4Q9NQP4 134 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 AGPAT4Q9NRZ5 378 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 SEPT3Q9UH03 358 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 FAM50BQ9Y247 325 aa18.08■□□□□ 0.49
TDP2-202ENST00000378198 A0A1B0GTW7 788 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 A0A1W2PP18 115 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 H3BSA7 217 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 KLK8O60259 260 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 PYGLP06737 847 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 CDH2P19022 906 aaPredicted RBP18.08■□□□□ 0.48
TDP2-202ENST00000378198 KCNK10P57789 538 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 MRPL58Q14197 206 aaKnown RBP18.08■□□□□ 0.48
TDP2-202ENST00000378198 CAPRIN1Q14444 709 aaKnown RBP18.08■□□□□ 0.48
TDP2-202ENST00000378198 TAF1AQ15573 450 aaPredicted RBP18.08■□□□□ 0.48
TDP2-202ENST00000378198 C9orf16Q9BUW7 83 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 CLK4Q9HAZ1 481 aaKnown RBP18.08■□□□□ 0.48
TDP2-202ENST00000378198 C8orf4Q9NR00 106 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 TRMT13Q9NUP7 481 aaKnown RBP18.08■□□□□ 0.48
TDP2-202ENST00000378198 EGFL7Q9UHF1 273 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 VPS9D1Q9Y2B5 631 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 MED16Q9Y2X0 877 aa18.08■□□□□ 0.48
TDP2-202ENST00000378198 ZFC3H1O60293 1989 aaKnown RBP18.08■□□□□ 0.48
TDP2-202ENST00000378198 TYW5A2RUC4 315 aaKnown RBP18.07■□□□□ 0.48
TDP2-202ENST00000378198 CHEK2O96017 543 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 CYBBP04839 570 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 GPIP06744 558 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 PRSS56P0CW18 603 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 HOXD9P28356 352 aaPredicted RBP18.07■□□□□ 0.48
TDP2-202ENST00000378198 GNA12Q03113 381 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 BIRC2Q13490 618 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 GLT6D1Q7Z4J2 308 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 OR4K2Q8NGD2 314 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 SPATA17Q96L03 361 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 MYRFLQ96LU7 910 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 CINPQ9BW66 212 aaPredicted RBP18.07■□□□□ 0.48
TDP2-202ENST00000378198 AIG1Q9NVV5 245 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 TMCO1Q9UM00 188 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 ARIH1Q9Y4X5 557 aaPredicted RBP18.07■□□□□ 0.48
TDP2-202ENST00000378198 SPO11Q9Y5K1 396 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 SAC3D1A6NKF1 404 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 BMP10O95393 424 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 MLYCDO95822 493 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 UROSP10746 265 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 FCGR1AP12314 374 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 PSMA3P25788 255 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 PLOD1Q02809 727 aaPredicted RBP18.07■□□□□ 0.48
TDP2-202ENST00000378198 NFYCQ13952 458 aa18.07■□□□□ 0.48
TDP2-202ENST00000378198 TSNQ15631 228 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms