RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SPRYD7Q5W111 196 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CYHR1Q6ZMK1 362 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 TFAP2DQ7Z6R9 452 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 OR13F1Q8NGS4 319 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 SEZ6LQ9BYH1 1024 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 IFT80Q9P2H3 777 aaPredicted RBP16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 SEPT3Q9UH03 358 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 B3GNT3Q9Y2A9 372 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 TMED5Q9Y3A6 229 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 OR51F1A6NGY5 319 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 J3KR12 359 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 POLR2IP36954 125 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 GRIK1P39086 918 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CDKN2DP55273 166 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CDH13P55290 713 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 SCD5Q86SK9 330 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CILP2Q8IUL8 1156 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 MYRFLQ96LU7 910 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 C3orf30Q96M34 536 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 PPP1R2P1Q96PQ5 205 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 HOPXQ9BPY8 73 aaPredicted RBP16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 YTHDF1Q9BYJ9 559 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 SLC25A51Q9H1U9 297 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 NOL6Q9H6R4 1146 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 MAP10Q9P2G4 905 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CRYL1Q9Y2S2 319 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CLPXO76031 633 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 IMPDH1P20839 514 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 ARSDP51689 593 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 IHHQ14623 411 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 KIF19Q2TAC6 998 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CCNYL2Q5T2Q4 361 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 AFMIDQ63HM1 303 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 PIM3Q86V86 326 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 IGFN1Q86VF2 1251 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 SCML4Q8N228 414 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 TRPV3Q8NET8 790 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 TSPAN17Q96FV3 270 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 GLT1D1Q96MS3 346 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 PARK7Q99497 189 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 KATNAL1Q9BW62 490 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 SMOC2Q9H3U7 446 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 FANCEQ9HB96 536 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 ARNT2Q9HBZ2 717 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 ATAD3AQ9NVI7 634 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 GIT1Q9Y2X7 761 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 GPC6Q9Y625 555 aaPredicted RBP16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 MIA3Q5JRA6 1907 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 NR5A2O00482 541 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 KPNA4O00629 521 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 PEX11BO96011 259 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 JAK1P23458 1154 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 RPS9P46781 194 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 PURAQ00577 322 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 SLC10A7Q0GE19 358 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 TAF2Q6P1X5 1199 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 LARP4Q71RC2 724 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 ISCA2Q86U28 154 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 SLC22A9Q8IVM8 553 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 ADGRG5Q8IZF4 528 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 BPIFB6Q8NFQ5 453 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 PNPT1Q8TCS8 783 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 EXT2Q93063 718 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 TAMM41Q96BW9 452 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 PKMYT1Q99640 499 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 TRIM62Q9BVG3 475 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 NANOGQ9H9S0 305 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 C8orf4Q9NR00 106 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 ACTR3BQ9P1U1 418 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 A0A0J9YYE9 177 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 KCNH1O95259 989 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 SNAP29O95721 258 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 MLLT6P55198 1093 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 DSC2Q02487 901 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 BNIP2Q12982 314 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 MAP2K5Q13163 448 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 CAPRIN1Q14444 709 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 FSCN1Q16658 493 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 CYP51A1Q16850 503 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 VPS26BQ4G0F5 336 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 LCN8Q6JVE9 175 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 BEND5Q7L4P6 421 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 OR52K2Q8NGK3 314 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 IMP4Q96G21 291 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 MARCH4Q9P2E8 410 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 PSME2Q9UL46 239 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 TSC22D4Q9Y3Q8 395 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 KCTD3Q9Y597 815 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 TRPV2Q9Y5S1 764 aa16.53■□□□□ 0.24
PCDHA1-201ENST00000378133 KRBA1A5PL33 1030 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 F8W810 466 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 PPP6CO00743 305 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 CNOT3O75175 753 aaKnown RBP16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 CPNE6O95741 557 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 CHRNA1P02708 482 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 SLC4A1P02730 911 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 GSTT2P0CG29 244 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 GSTT2BP0CG30 244 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms