RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 FRRS1Q6ZNA5 592 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 ADAMTSL2Q86TH1 951 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 GFM1Q96RP9 751 aaKnown RBP13.66□□□□□ -0.22
COL4A1-201ENST00000375820 SEC14L3Q9UDX4 400 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 RPTORQ8N122 1335 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 ARHGEF33A8MVX0 844 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 HDAC3O15379 428 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 SERPINA6P08185 405 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 AZGP1P25311 298 aaKnown RBP13.66□□□□□ -0.22
COL4A1-201ENST00000375820 MNDAP41218 407 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 DACT2Q5SW24 774 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 TREML2Q5T2D2 321 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 RASSF6Q6ZTQ3 369 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 OR14C36Q8NHC7 312 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 B3GALT6Q96L58 329 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 UROC1Q96N76 676 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 CACNG4Q9UBN1 327 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 VWA7Q9Y334 891 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 IFNA6P05013 189 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
COL4A1-201ENST00000375820 CAPGP40121 348 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 C2orf80Q0P641 193 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 NIPA1Q7RTP0 329 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 ADAMTS15Q8TE58 950 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 C11orf24Q96F05 449 aaPredicted RBP13.66□□□□□ -0.22
COL4A1-201ENST00000375820 TDRD1Q9BXT4 1180 aaKnown RBP13.66□□□□□ -0.22
COL4A1-201ENST00000375820 ZNF446Q9NWS9 450 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 ING3Q9NXR8 418 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 MADDQ8WXG6 1647 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 LYNP07948 512 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 GNALP38405 381 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 GABRB2P47870 512 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 MPP1Q00013 466 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 PDK4Q16654 411 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 RNASEH2BQ5TBB1 312 aaKnown RBP13.66□□□□□ -0.22
COL4A1-201ENST00000375820 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 PHYKPLQ8IUZ5 450 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 SFRP1Q8N474 314 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 UBR7Q8N806 425 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 FAM81AQ8TBF8 368 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 GTPBP3Q969Y2 492 aaKnown RBP13.66□□□□□ -0.22
COL4A1-201ENST00000375820 NXNL1Q96CM4 212 aa13.66□□□□□ -0.22
COL4A1-201ENST00000375820 CHMP1AQ9HD42 196 aaPredicted RBP13.66□□□□□ -0.22
COL4A1-201ENST00000375820 KCNU1A8MYU2 1149 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 SNAP91O60641 907 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 ADH1AP07327 375 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 NCK1P16333 377 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 ARFIP1P53367 373 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 HSF2Q03933 536 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 C5orf22Q49AR2 442 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 RBFAQ8N0V3 343 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 AP2M1Q96CW1 435 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 MAML3Q96JK9 1138 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CCDC162PA2VCL2 907 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 KLRG2A4D1S0 409 aaPredicted RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 IDO1P14902 403 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 ALDH4A1P30038 563 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 MEA1Q16626 185 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 NT5DC1Q5TFE4 455 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 HECTD2Q5U5R9 776 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 TNS2Q63HR2 1409 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CHSY3Q70JA7 882 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 FAM71AQ8IYT1 594 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 GPC2Q8N158 579 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CLCC1Q96S66 551 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 FAM129BQ96TA1 746 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 LRIG2O94898 1065 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 COL6A1P12109 1028 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CDH5P33151 784 aaPredicted RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 OAZ1P54368 228 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 ANXA8L1Q5VT79 327 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CFAP206Q8IYR0 622 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 OR2T12Q8NG77 320 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 FAM192AQ9GZU8 254 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CTPS2Q9NRF8 586 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 GGA2Q9UJY4 613 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 MAFO75444 373 aaPredicted RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 KCNA5P22460 613 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 MASP1P48740 699 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 SMIM11AP58511 58 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 NOMO3P69849 1222 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 TRAP1Q12931 704 aaKnown RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 C17orf64Q86WR6 236 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 DHRS1Q96LJ7 313 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CYP2S1Q96SQ9 504 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CNPPD1Q9BV87 410 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 SAP18O00422 153 aaKnown RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 XKRYO14609 159 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 INMTO95050 263 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 TCF4P15884 667 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 TAF10Q12962 218 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms