RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 NIPSNAP2O75323 286 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 LDLRP01130 860 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 TNNI3P19429 210 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 HTR1BP28222 390 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 GALNT2Q10471 571 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 KLF10Q13118 480 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 SIRPB2Q5JXA9 342 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 PRR23CQ6ZRP0 262 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 GK5Q6ZS86 529 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 CLDN19Q8N6F1 224 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 GSTCDQ8NEC7 633 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 ITFG1Q8TB96 612 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 PXYLP1Q8TE99 480 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 ACDQ96AP0 544 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 NOL11Q9H8H0 719 aaKnown RBP17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 ILVBLA1L0T0 632 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 STK16O75716 305 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 PSMG1O95456 288 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 CYP4F2P78329 520 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 TMEM132CQ8N3T6 1108 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 OR10G6Q8NH81 332 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 REPS1Q96D71 796 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 TMEM79Q9BSE2 394 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 TRMOQ9BU70 441 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 IPPKQ9H8X2 491 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 RNPEPL1Q9HAU8 725 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 SCN3BQ9NY72 215 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 PSMD13Q9UNM6 376 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 PCDHB1Q9Y5F3 818 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 PEX1O43933 1283 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 PRNPP04156 253 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 CNPP09543 421 aaKnown RBP17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 AMD1P17707 334 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 GKP32189 559 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 SLC7A2P52569 658 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 SQLEQ14534 574 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 TXNDC11Q6PKC3 985 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 APOLD1Q96LR9 279 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 TDP1Q9NUW8 608 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 KCTD5Q9NXV2 234 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 H2AFY2Q9P0M6 372 aaPredicted RBP17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 CNTN6Q9UQ52 1028 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 MYO5AQ9Y4I1 1855 aaKnown RBP17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 QSOX1O00391 747 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 CHRNGP07510 517 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 PAQR3Q6TCH7 311 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 MICU2Q8IYU8 434 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 KLHL23Q8NBE8 558 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 DCAKDQ8WVC6 231 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 SIGLEC10Q96LC7 697 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 ROGDIQ9GZN7 287 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 BATF3Q9NR55 127 aa17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 SCHIP1Q9P0W5 487 aaPredicted RBP17.88■□□□□ 0.45
PTPDC1-202ENST00000375360 ERAL1O75616 437 aaKnown RBP17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 AHSGP02765 367 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 C16orf87Q6PH81 154 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 CPA6Q8N4T0 437 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 C10orf53Q8N6V4 93 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 FERD3LQ96RJ6 166 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 OSBPL7Q9BZF2 842 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 PSAT1Q9Y617 370 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 DEAF1O75398 565 aaPredicted RBP17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 CRATP43155 626 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 LYSMD3Q7Z3D4 306 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 C3orf58Q8NDZ4 430 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 UTP15Q8TED0 518 aaKnown RBP17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 FEM1CQ96JP0 617 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 NDRG2Q9UN36 371 aaKnown RBP17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 hCG_2014768A0A024R1R8 64 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 HNRNPCL2B2RXH8 293 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 HPGDP15428 266 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 RP9Q8TA86 221 aaKnown RBP17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 USP29Q9HBJ7 922 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 PNPLA8Q9NP80 782 aa17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 POLR3HQ9Y535 204 aaPredicted RBP17.87■□□□□ 0.45
PTPDC1-202ENST00000375360 COCHO43405 550 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 PPP2R1BP30154 601 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 ANXA11P50995 505 aaKnown RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 ECT2LQ008S8 904 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 TEAD2Q15562 447 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 PRMT9Q6P2P2 845 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 ZBTB2Q8N680 514 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 RBM15BQ8NDT2 890 aaKnown RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 SMAD5Q99717 465 aaKnown RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 FFAR2O15552 330 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 SIX3O95343 332 aaPredicted RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 MBLAC2Q68D91 279 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 ZNF598Q86UK7 904 aaKnown RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 C12orf76Q8N812 135 aaPredicted RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 NAT14Q8WUY8 206 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 CLP1Q92989 425 aaKnown RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 LENG8Q96PV6 779 aaPredicted RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 EIF2B4Q9UI10 523 aaKnown RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 GGA2Q9UJY4 613 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 RWDD3Q9Y3V2 267 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 TJP1Q07157 1748 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 EPN2O95208 641 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 CLCQ05315 142 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 SLC20A2Q08357 652 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms