RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ZNF805Q5CZA5 627 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 GDPD4Q6W3E5 623 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.46■□□□□ 0.87
SYNC-201ENST00000373484 LPCAT2Q7L5N7 544 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 SPDYE1Q8NFV5 336 aaPredicted RBP20.46■□□□□ 0.87
SYNC-201ENST00000373484 TFB1MQ8WVM0 346 aaKnown RBP20.46■□□□□ 0.87
SYNC-201ENST00000373484 GATA6Q92908 595 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 TUBGCP5Q96RT8 1024 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 IL12RB2Q99665 862 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 ZNF184Q99676 751 aaPredicted RBP20.46■□□□□ 0.87
SYNC-201ENST00000373484 GPR174Q9BXC1 333 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 HDAC8Q9BY41 377 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 RBM22Q9NW64 420 aaKnown RBP eCLIP20.46■□□□□ 0.87
SYNC-201ENST00000373484 DOCK9Q9BZ29 2069 aa20.46■□□□□ 0.87
SYNC-201ENST00000373484 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 TCRBV9S1A1TA0A576 114 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 WDR91A4D1P6 747 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 ANKRD33BA6NCL7 494 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 GJB3O75712 270 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 SEMA4FO95754 770 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 PDHA1P08559 390 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 SNRPAP09012 282 aaKnown RBP20.45■□□□□ 0.86
SYNC-201ENST00000373484 MAPK8P45983 427 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 ADPRHP54922 357 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 MAXP61244 160 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 AP1S1P61966 158 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 SARNPP82979 210 aaKnown RBP20.45■□□□□ 0.86
SYNC-201ENST00000373484 OVGP1Q12889 678 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 KCNJ11Q14654 390 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 PIP5KL1Q5T9C9 394 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 ALG1LQ6GMV1 187 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 KYAT3Q6YP21 454 aaKnown RBP20.45■□□□□ 0.86
SYNC-201ENST00000373484 RINLQ6ZS11 566 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 ERN2Q76MJ5 926 aaKnown RBP20.45■□□□□ 0.86
SYNC-201ENST00000373484 ZC3H18Q86VM9 953 aaKnown RBP20.45■□□□□ 0.86
SYNC-201ENST00000373484 TMEFF1Q8IYR6 380 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 MRRFQ96E11 262 aaKnown RBP20.45■□□□□ 0.86
SYNC-201ENST00000373484 KLHL32Q96NJ5 620 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 FRYLO94915 3013 aa20.45■□□□□ 0.86
SYNC-201ENST00000373484 HACD1B0YJ81 288 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 COPEO14579 308 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 BIRC5O15392 142 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 KRT36O76013 467 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 PIGNO95427 931 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 MYL2P10916 166 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 PEX19P40855 299 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 GDF10P55107 478 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 EIF3EP60228 445 aaKnown RBP20.44■□□□□ 0.86
SYNC-201ENST00000373484 ZBTB17Q13105 803 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 RALGPS1Q5JS13 557 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 AP1ARQ63HQ0 302 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 LAIR1Q6GTX8 287 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 PARS2Q7L3T8 475 aaKnown RBP20.44■□□□□ 0.86
SYNC-201ENST00000373484 PDCD7Q8N8D1 485 aaKnown RBP20.44■□□□□ 0.86
SYNC-201ENST00000373484 CADM4Q8NFZ8 388 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 NRG4Q8WWG1 115 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 RTP4Q96DX8 246 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 NSMCE3Q96MG7 304 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 QKIQ96PU8 341 aaKnown RBP eCLIP20.44■□□□□ 0.86
SYNC-201ENST00000373484 POLR1EQ9GZS1 481 aaKnown RBP20.44■□□□□ 0.86
SYNC-201ENST00000373484 IQCGQ9H095 443 aaKnown RBP20.44■□□□□ 0.86
SYNC-201ENST00000373484 STN1Q9H668 368 aaKnown RBP20.44■□□□□ 0.86
SYNC-201ENST00000373484 ATP13A3Q9H7F0 1226 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 SIRPGQ9P1W8 387 aa20.44■□□□□ 0.86
SYNC-201ENST00000373484 TTC24A2A3L6 582 aaPredicted RBP20.43■□□□□ 0.86
SYNC-201ENST00000373484 PLRG1O43660 514 aaKnown RBP20.43■□□□□ 0.86
SYNC-201ENST00000373484 BANF1O75531 89 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 CIB2O75838 187 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 SNUPNO95149 360 aaKnown RBP20.43■□□□□ 0.86
SYNC-201ENST00000373484 JCHAINP01591 159 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 HLA-DQB2P05538 268 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 RCN2Q14257 317 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 AAGABQ6PD74 315 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 NCEH1Q6PIU2 408 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 SLC41A1Q8IVJ1 513 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 OR14C36Q8NHC7 312 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 LOXL4Q96JB6 756 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 SERAC1Q96JX3 654 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 ZNF641Q96N77 438 aaPredicted RBP20.43■□□□□ 0.86
SYNC-201ENST00000373484 FAM111AQ96PZ2 611 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 PCED1AQ9H1Q7 454 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 SUV39H2Q9H5I1 410 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 SCUBE2Q9NQ36 999 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 PAK5Q9P286 719 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 DKK3Q9UBP4 350 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 PLLPQ9Y342 182 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 GON4LQ3T8J9 2241 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 C16orf96A6NNT2 1141 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 TM7SF2O76062 418 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 SERPINA4P29622 427 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 ELK3P41970 407 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 TAS2R38P59533 333 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 CAMK1DQ8IU85 385 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 DEFB119Q8N690 84 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 CNTD1Q8N815 330 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 OR2T34Q8NGX1 318 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 HCAR2Q8TDS4 363 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 C6orf106Q9H6K1 298 aaPredicted RBP20.43■□□□□ 0.86
SYNC-201ENST00000373484 IL1RAPL1Q9NZN1 696 aa20.43■□□□□ 0.86
SYNC-201ENST00000373484 TAGLN3Q9UI15 199 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms