RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 C8orf82Q6P1X6 216 aaPredicted RBP23.69■■□□□ 1.38
CDK9-201ENST00000373264 SATL1Q86VE3 508 aa23.69■■□□□ 1.38
CDK9-201ENST00000373264 NPAS4Q8IUM7 802 aa23.69■■□□□ 1.38
CDK9-201ENST00000373264 OR6K2Q8NGY2 324 aa23.69■■□□□ 1.38
CDK9-201ENST00000373264 EEF1AKMT1Q8WVE0 214 aa23.69■■□□□ 1.38
CDK9-201ENST00000373264 RPL10LQ96L21 214 aaKnown RBP23.69■■□□□ 1.38
CDK9-201ENST00000373264 ELAC1Q9H777 363 aaKnown RBP23.69■■□□□ 1.38
CDK9-201ENST00000373264 KERAO60938 352 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 PENKP01210 267 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 CES1P23141 567 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 PLD1Q13393 1074 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 TAF1AQ15573 450 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 C18orf21Q32NC0 220 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 TMCO2Q7Z6W1 182 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 RHEBL1Q8TAI7 183 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 ZNF483Q8TF39 744 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 PEX13Q92968 403 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 AP4S1Q9Y587 144 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 ZNF839A8K0R7 811 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 TSPAN12O95859 305 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 SMIM18P0DKX4 95 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 KPNA1P52294 538 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 STX1BP61266 288 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 ZNF177Q13360 481 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 LIN52Q52LA3 116 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 ZRANB3Q5FWF4 1079 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 ATXN7L2Q5T6C5 722 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 AFTPHQ6ULP2 937 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 RAB44Q7Z6P3 723 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 ST13P4Q8IZP2 240 aaPredicted RBP23.68■■□□□ 1.38
CDK9-201ENST00000373264 BBS5Q8N3I7 341 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 DLG3Q92796 817 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 CDK15Q96Q40 435 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 SLC22A12Q96S37 553 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 CCDC68Q9H2F9 335 aa23.68■■□□□ 1.38
CDK9-201ENST00000373264 C7orf72A4D263 438 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 H7C4K7 107 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 NME4O00746 187 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 ATP6V1B2P21281 511 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 CA5AP35218 305 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 PSMD8P48556 350 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 SYVN1Q86TM6 617 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 STAG3L4Q8TBR4 150 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 EID2BQ96D98 161 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 DERL2Q9GZP9 239 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 INTS10Q9NVR2 710 aaKnown RBP23.67■■□□□ 1.38
CDK9-201ENST00000373264 EGFL7Q9UHF1 273 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 SNX13Q9Y5W8 968 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 TMCC1O94876 653 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 FGF4P08620 206 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 CTPS1P17812 591 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 BTG3Q14201 252 aaPredicted RBP23.67■■□□□ 1.38
CDK9-201ENST00000373264 MTX3Q5HYI7 312 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 HMBOX1Q6NT76 420 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 IYDQ6PHW0 289 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 HERC6Q8IVU3 1022 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 CPNE9Q8IYJ1 553 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 NUDT8Q8WV74 236 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 VPS33AQ96AX1 596 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 TRAPPC9Q96Q05 1148 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 COQ10BQ9H8M1 238 aa23.67■■□□□ 1.38
CDK9-201ENST00000373264 PAPOLBQ9NRJ5 636 aaKnown RBP23.67■■□□□ 1.38
CDK9-201ENST00000373264 FCF1Q9Y324 198 aaKnown RBP23.67■■□□□ 1.38
CDK9-201ENST00000373264 C2orf81A6NN90 581 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 ANKRD66B4E2M5 251 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 K7ERQ8 282 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 DENRO43583 198 aaKnown RBP23.66■■□□□ 1.38
CDK9-201ENST00000373264 ALDH1A1P00352 501 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 C8BP07358 591 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 NELFEP18615 380 aaKnown RBP23.66■■□□□ 1.38
CDK9-201ENST00000373264 RAD51Q06609 339 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 CNPY1Q3B7I2 92 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 PLA2G4EQ3MJ16 856 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 DEFB128Q7Z7B8 93 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 FAM126BQ8IXS8 530 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 WFDC5Q8TCV5 224 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 HBEGFQ99075 208 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 SLC29A1Q99808 456 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 CLSTN3Q9BQT9 956 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 LCHNA4D1U4 455 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 CLDN11O75508 207 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 C1RP00736 705 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 COL6A1P12109 1028 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 ZNF26P17031 533 aaPredicted RBP23.66■■□□□ 1.38
CDK9-201ENST00000373264 MYBPC1Q00872 1141 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 RHDQ02161 417 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 LCP2Q13094 533 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.66■■□□□ 1.38
CDK9-201ENST00000373264 MARVELD2Q8N4S9 558 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 ADCY4Q8NFM4 1077 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 POPDC3Q9HBV1 291 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 EPS15L1Q9UBC2 864 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 BCAP29Q9UHQ4 241 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 TBC1D30Q9Y2I9 924 aa23.66■■□□□ 1.38
CDK9-201ENST00000373264 PQBP1O60828 265 aaKnown RBP23.65■■□□□ 1.38
CDK9-201ENST00000373264 TIPRLO75663 272 aa23.65■■□□□ 1.38
CDK9-201ENST00000373264 FESP07332 822 aa23.65■■□□□ 1.38
CDK9-201ENST00000373264 ALPIP09923 528 aa23.65■■□□□ 1.38
CDK9-201ENST00000373264 PIM1P11309 404 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms