RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 NPNTQ6UXI9 565 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 CHST15Q7LFX5 561 aaPredicted RBP13.05□□□□□ -0.32
RPF1-201ENST00000370654 KDELC2Q7Z4H8 507 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 GALNT13Q8IUC8 556 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 CCDC13Q8IYE1 715 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 NRSN1Q8IZ57 195 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 PLD5Q8N7P1 536 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 EXD1Q8NHP7 514 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 FATE1Q969F0 183 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 RNF157Q96PX1 679 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 TAAR9Q96RI9 348 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 LYSMD1Q96S90 227 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 SETXQ7Z333 2677 aaKnown RBP13.04□□□□□ -0.32
RPF1-201ENST00000370654 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.04□□□□□ -0.32
RPF1-201ENST00000370654 SLC28A2O43868 658 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 ACP5P13686 325 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 HNRNPH3P31942 346 aaKnown RBP13.04□□□□□ -0.32
RPF1-201ENST00000370654 FASLGP48023 281 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 NFATC2Q13469 925 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 BIRC2Q13490 618 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 PDK2Q15119 407 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 SNAP47Q5SQN1 464 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 ANKS6Q68DC2 871 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 TMEM71Q6P5X7 295 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 IYDQ6PHW0 289 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 LYSMD3Q7Z3D4 306 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 BMPERQ8N8U9 685 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 CCNYQ8ND76 341 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 GPR26Q8NDV2 337 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 HDAC11Q96DB2 347 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 TRIB3Q96RU7 358 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 CTRCQ99895 268 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 SLC12A9Q9BXP2 914 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 TRIM4Q9C037 500 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
RPF1-201ENST00000370654 SEPT10Q9P0V9 454 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 SCHIP1Q9P0W5 487 aaPredicted RBP13.04□□□□□ -0.32
RPF1-201ENST00000370654 PDP2Q9P2J9 529 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 ATXN10Q9UBB4 475 aa13.04□□□□□ -0.32
RPF1-201ENST00000370654 EFCAB7A8K855 629 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 ANKRD66B4E2M5 251 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 SNX2O60749 519 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 LIFP15018 202 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 ZNF8P17098 575 aaPredicted RBP13.03□□□□□ -0.32
RPF1-201ENST00000370654 UGT1A3P35503 534 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 PPIDQ08752 370 aaKnown RBP13.03□□□□□ -0.32
RPF1-201ENST00000370654 MESDQ14696 234 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 CLPPQ16740 277 aaPredicted RBP13.03□□□□□ -0.32
RPF1-201ENST00000370654 ALS2CLQ60I27 953 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 NDUFAF2Q8N183 169 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 AGBL5Q8NDL9 886 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 SLC38A3Q99624 504 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 CHP1Q99653 195 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 SPRY4Q9C004 299 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 FAM83DQ9H4H8 585 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 APMAPQ9HDC9 416 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 PRDM8Q9NQV8 689 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 STARD5Q9NSY2 213 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 SLC39A1Q9NY26 324 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 UVRAGQ9P2Y5 699 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 SLC23A2Q9UGH3 650 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 AMACRQ9UHK6 382 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 TMPRSS11EQ9UL52 423 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 SHOC2Q9UQ13 582 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 HYOU1Q9Y4L1 999 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 PCDHB11Q9Y5F2 797 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 PCDHGA3Q9Y5H0 932 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 ADGRG1Q9Y653 693 aa13.03□□□□□ -0.32
RPF1-201ENST00000370654 FLNBO75369 2602 aaKnown RBP13.02□□□□□ -0.33
RPF1-201ENST00000370654 STMND1H3BQB6 276 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 ITGB2P05107 769 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 H2AFZP0C0S5 128 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 CES1P23141 567 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 CD82P27701 267 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
RPF1-201ENST00000370654 RPL26P61254 145 aaKnown RBP13.02□□□□□ -0.33
RPF1-201ENST00000370654 IFI35P80217 286 aaPredicted RBP13.02□□□□□ -0.33
RPF1-201ENST00000370654 HHEXQ03014 270 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
RPF1-201ENST00000370654 SLC18A3Q16572 532 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 KHDC1Q4VXA5 237 aaKnown RBP13.02□□□□□ -0.33
RPF1-201ENST00000370654 H2AFVQ71UI9 128 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 TIPARPQ7Z3E1 657 aaKnown RBP13.02□□□□□ -0.33
RPF1-201ENST00000370654 PRICKLE2Q7Z3G6 844 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 ARHGAP22Q7Z5H3 698 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 FAM129CQ86XR2 697 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 SPATA22Q8NHS9 363 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 SLC35G2Q8TBE7 412 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 TADA1Q96BN2 335 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 MLPHQ9BV36 600 aaPredicted RBP13.02□□□□□ -0.33
RPF1-201ENST00000370654 TBC1D10AQ9BXI6 508 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 B3GNT4Q9C0J1 378 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 SPTLC3Q9NUV7 552 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 OGFRQ9NZT2 677 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 VPS18Q9P253 973 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 RPL26L1Q9UNX3 145 aaKnown RBP13.02□□□□□ -0.33
RPF1-201ENST00000370654 HEY1Q9Y5J3 304 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 BOD1L1Q8NFC6 3051 aa13.02□□□□□ -0.33
RPF1-201ENST00000370654 ASH1LQ9NR48 2969 aaKnown RBP13.01□□□□□ -0.33
RPF1-201ENST00000370654 LRRD1A4D1F6 860 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms