RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ZC3H18Q86VM9 953 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 CHSY1Q86X52 802 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CIR1Q86X95 450 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 LIX1LQ8IVB5 337 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 IGDCC3Q8IVU1 814 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ARHGAP12Q8IWW6 846 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CCDC89Q8N998 374 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 LEMD2Q8NC56 503 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 P3H4Q92791 437 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 SLCO2A1Q92959 643 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ERP27Q96DN0 273 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TBC1D31Q96DN5 1066 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CELF6Q96J87 481 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 SIGLEC10Q96LC7 697 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 PRICKLE1Q96MT3 831 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 OLFM3Q96PB7 478 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 GCNAQ96QF7 691 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TMEM121Q9BTD3 319 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 PARD6BQ9BYG5 372 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 LINC00597Q9H2U6 94 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 SLITRK6Q9H5Y7 841 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 USP29Q9HBJ7 922 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 VPS45Q9NRW7 570 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 SLC12A6Q9UHW9 1150 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 STOML2Q9UJZ1 356 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ARHGAP26Q9UNA1 814 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 DOCK4Q8N1I0 1966 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 GOLGA6L10A0A0M3HER8 536 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 A0A1B0GVC2 190 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CAPN8A6NHC0 703 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CCDC154A6NI56 674 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 RHPN2P1A8MT19 583 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 H7C0C1 242 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 NCAM2O15394 837 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TBX10O75333 385 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CD40P25942 277 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 IVDP26440 423 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 RBL1P28749 1068 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 HTR7P34969 479 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 VIPR2P41587 438 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ATP5OP48047 213 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 LIMS1P48059 325 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 RXRGP48443 463 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 NR2C2P49116 596 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 SLC11A2P49281 568 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ZNF135P52742 658 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 PRR5P85299 388 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 GUCY2DQ02846 1103 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TRIM25Q14258 630 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 TRIP13Q15645 432 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 UGT8Q16880 541 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CCDC38Q502W7 563 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 GLE1Q53GS7 698 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 ARHGAP15Q53QZ3 475 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ZNF385BQ569K4 471 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 FAM78AQ5JUQ0 283 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 DUPD1Q68J44 220 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 C8orf74Q6P047 294 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 FAM180BQ6P0A1 224 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ZC3H14Q6PJT7 736 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 TMCO3Q6UWJ1 677 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 UNQ6494/PRO21346Q6UXR6 183 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CEP68Q76N32 757 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TFAP2DQ7Z6R9 452 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ARID3BQ8IVW6 561 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 BBS7Q8IWZ6 715 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 FAM217AQ8IXS0 508 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CCDC105Q8IYK2 499 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ALLCQ8N6M5 410 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 RTL3Q8N8U3 475 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 FAM71DQ8N9W8 422 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 OR52K2Q8NGK3 314 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CCDC26Q8TAB7 109 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 DEPDC1BQ8WUY9 529 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CASKIN2Q8WXE0 1202 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 PPP2R3CQ969Q6 453 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 MSLNLQ96KJ4 702 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TBATAQ96M53 351 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 RPRD1AQ96P16 312 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 LGMNQ99538 433 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 FRMD8P1Q9BZ68 369 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 ZYG11BQ9C0D3 744 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 SLC39A8Q9C0K1 460 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ADAM7Q9H2U9 754 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 GDF3Q9NR23 364 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 HOMER3Q9NSC5 361 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TDP1Q9NUW8 608 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TMEM248Q9NWD8 314 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 EVLQ9UI08 416 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 ZNF148Q9UQR1 794 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ZFP37Q9Y6Q3 630 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 MYOFQ9NZM1 2061 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 BCLAF3A2AJT9 711 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 TARSL2A2RTX5 802 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 B9A039 149 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 F5H5T6 163 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 F8W8V4 182 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TP73O15350 636 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TBL1XO60907 577 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms