RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CDK14O94921 469 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 PRNPP04156 253 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 NMBRP28336 390 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 SSR2P43308 183 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 MOSPD2Q8NHP6 518 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 ZNF671Q8TAW3 534 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 C2orf15Q8WU43 125 aaKnown RBP19.58■□□□□ 0.72
LMO4-202ENST00000370544 TTLL2Q9BWV7 592 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 NUAK2Q9H093 628 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 FCF1Q9Y324 198 aaKnown RBP19.58■□□□□ 0.72
LMO4-202ENST00000370544 C2orf71A6NGG8 1288 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 TSC22D2O75157 780 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 MANFP55145 182 aaKnown RBP19.58■□□□□ 0.72
LMO4-202ENST00000370544 GSTCDQ8NEC7 633 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 OR2T12Q8NG77 320 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 EMID1Q96A84 441 aaPredicted RBP19.58■□□□□ 0.72
LMO4-202ENST00000370544 TSSK3Q96PN8 268 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 AIF1LQ9BQI0 150 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 OSBPL11Q9BXB4 747 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 COQ4Q9Y3A0 265 aa19.58■□□□□ 0.72
LMO4-202ENST00000370544 PSMD7P51665 324 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 IL10RBQ08334 325 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 TSTD2Q5T7W7 516 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 APOLD1Q96LR9 279 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 MCCC1Q96RQ3 725 aaPredicted RBP19.57■□□□□ 0.72
LMO4-202ENST00000370544 NMUR1Q9HB89 426 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 PCDHGC4Q9Y5F7 938 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 LMO7Q8WWI1 1683 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 COL14A1Q05707 1796 aaKnown RBP19.57■□□□□ 0.72
LMO4-202ENST00000370544 PEAK1Q9H792 1746 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 DYTNA2CJ06 578 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 MT-CYBP00156 380 aaPredicted RBP19.57■□□□□ 0.72
LMO4-202ENST00000370544 ACAP2Q15057 778 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 CPSF7Q8N684 471 aaKnown RBP19.57■□□□□ 0.72
LMO4-202ENST00000370544 NMUR2Q9GZQ4 415 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 SLC28A3Q9HAS3 691 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 MAT2BQ9NZL9 334 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 INHAP05111 366 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 RPL4P36578 427 aaKnown RBP19.57■□□□□ 0.72
LMO4-202ENST00000370544 B3GNT6Q6ZMB0 384 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 OLFM1Q99784 485 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 CLIC5Q9NZA1 410 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 CD84Q9UIB8 345 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 CCL22O00626 93 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 ADAMTS3O15072 1205 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 STK16O75716 305 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 GOT2P00505 430 aaKnown RBP19.57■□□□□ 0.72
LMO4-202ENST00000370544 EPHX1P07099 455 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 ATP12AP54707 1039 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 SPIRE1Q08AE8 756 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 PRSS55Q6UWB4 352 aaPredicted RBP19.57■□□□□ 0.72
LMO4-202ENST00000370544 FAM220AQ7Z4H9 259 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 ARL14EPQ8N8R7 260 aaPredicted RBP19.57■□□□□ 0.72
LMO4-202ENST00000370544 CPQQ9Y646 472 aa19.57■□□□□ 0.72
LMO4-202ENST00000370544 POLR2JP52435 117 aaKnown RBP19.56■□□□□ 0.72
LMO4-202ENST00000370544 AP1S1P61966 158 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 CYP4F2P78329 520 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 PPIGQ13427 754 aaKnown RBP eCLIP19.56■□□□□ 0.72
LMO4-202ENST00000370544 ALG11Q2TAA5 492 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 KIAA0408Q6ZU52 694 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 PCDH19Q8TAB3 1148 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 PSMG2Q969U7 264 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 LGALS13Q9UHV8 139 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 YJEFN3A6XGL0 299 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 NAIF1Q69YI7 327 aaPredicted RBP19.56■□□□□ 0.72
LMO4-202ENST00000370544 DRICH1Q6PGQ1 229 aaPredicted RBP19.56■□□□□ 0.72
LMO4-202ENST00000370544 HDDC2Q7Z4H3 204 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 CLNKQ7Z7G1 428 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 PARGQ86W56 976 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 SLC9A7Q96T83 725 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 C12orf65Q9H3J6 166 aaKnown RBP19.56■□□□□ 0.72
LMO4-202ENST00000370544 HMG20AQ9NP66 347 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 PNPLA3Q9NST1 481 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 SATB2Q9UPW6 733 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 NRG1Q02297 640 aaPredicted RBP19.56■□□□□ 0.72
LMO4-202ENST00000370544 PRR23CQ6ZRP0 262 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 SFRP1Q8N474 314 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 UXS1Q8NBZ7 420 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 OR7A2PQ8NGA2 310 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 LPIN3Q9BQK8 851 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 TMEM109Q9BVC6 243 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 ZNF624Q9P2J8 865 aaPredicted RBP19.56■□□□□ 0.72
LMO4-202ENST00000370544 RWDD3Q9Y3V2 267 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 RPL17P18621 184 aaKnown RBP19.56■□□□□ 0.72
LMO4-202ENST00000370544 GDF10P55107 478 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 AP2M1Q96CW1 435 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 FAM83DQ9H4H8 585 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 C3orf14Q9HBI5 128 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 DUS2Q9NX74 493 aaKnown RBP19.56■□□□□ 0.72
LMO4-202ENST00000370544 TIMM22Q9Y584 194 aa19.56■□□□□ 0.72
LMO4-202ENST00000370544 NBNO60934 754 aa19.55■□□□□ 0.72
LMO4-202ENST00000370544 WASP42768 502 aa19.55■□□□□ 0.72
LMO4-202ENST00000370544 FOLH1Q04609 750 aa19.55■□□□□ 0.72
LMO4-202ENST00000370544 ESRP1Q6NXG1 681 aaKnown RBP19.55■□□□□ 0.72
LMO4-202ENST00000370544 FBXO22Q8NEZ5 403 aa19.55■□□□□ 0.72
LMO4-202ENST00000370544 NOL11Q9H8H0 719 aaKnown RBP19.55■□□□□ 0.72
LMO4-202ENST00000370544 EIF2B3Q9NR50 452 aaKnown RBP19.55■□□□□ 0.72
LMO4-202ENST00000370544 TOR4AQ9NXH8 423 aa19.55■□□□□ 0.72
LMO4-202ENST00000370544 PMM2O15305 246 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms