RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 EPB42P16452 691 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CES1P23141 567 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 GPR1P46091 355 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 KRT6CP48668 564 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 ATP6V0D1P61421 351 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 RPL38P63173 70 aaKnown RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 NRG1Q02297 640 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CREMQ03060 361 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 RING1Q06587 406 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 PREPLQ4J6C6 727 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 PITRM1Q5JRX3 1037 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 MBLAC2Q68D91 279 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 IYDQ6PHW0 289 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CRTC3Q6UUV7 619 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 ADAMTSL2Q86TH1 951 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 ST13P4Q8IZP2 240 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CLEC4FQ8N1N0 589 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 PYCR2Q96C36 320 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CNBD2Q96M20 576 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 FEM1AQ9BSK4 669 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 SLC25A23Q9BV35 468 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 NOL11Q9H8H0 719 aaKnown RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 TDP1Q9NUW8 608 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 MARCH5Q9NX47 278 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 SH3BP4Q9P0V3 963 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 GALPQ9UBC7 116 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 C15orf41Q9Y2V0 281 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CCDC154A6NI56 674 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 A8MT66 165 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 TNFRSF10BO14763 440 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 RNASEH1O60930 286 aaKnown RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 ULK1O75385 1050 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CDK14O94921 469 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 OR4F21O95013 312 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CYP2A6P11509 494 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CLCQ05315 142 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 TAF1AQ15573 450 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 TREML1Q86YW5 311 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 APCDD1Q8J025 514 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 ZNF784Q8NCA9 323 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 CYGBQ8WWM9 190 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 ACDQ96AP0 544 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 VPS50Q96JG6 964 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 ZFYVE19Q96K21 471 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 SORCS3Q9UPU3 1222 aa7.09□□□□□ -1.27
TGFBR3-202ENST00000370399 EME2A4GXA9 379 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 LRRC14BA6NHZ5 514 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 SAC3D1A6NKF1 404 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 MYO1GB0I1T2 1018 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 LRATO95237 230 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 SLC35E2BP0CK96 405 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 PABPC1P11940 636 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 VCLP18206 1134 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 GGT5P36269 586 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 CCNHP51946 323 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 PSME3P61289 254 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 AP1S1P61966 158 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 ZNF33AQ06730 810 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 NRF1Q16656 503 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 VPS26BQ4G0F5 336 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 TXNDC5Q8NBS9 432 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 FAM162AQ96A26 154 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 C19orf60Q96EN9 201 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 MYCBPQ99417 103 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 CCDC90BQ9GZT6 254 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 MFSD1Q9H3U5 465 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 ARHGEF3Q9NR81 526 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 DUS2Q9NX74 493 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 ZNF711Q9Y462 761 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 FER1L6Q2WGJ9 1857 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 LEFTY2O00292 366 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 KDELR3O43731 214 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 RASSF9O75901 435 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 EPHX1P07099 455 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 TYRP14679 529 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 CYP2A7P20853 494 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 HNF4AP41235 474 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 GRIA3P42263 894 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 GDF5P43026 501 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 CDKN1CP49918 316 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 SLC7A2P52569 658 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 DSG1Q02413 1049 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 OTUD3Q5T2D3 398 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 GRAMD4Q6IC98 578 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 CAPRIN2Q6IMN6 1127 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 TIFABQ6ZNK6 161 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 OR9I1Q8NGQ6 314 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 OR6Y1Q8NGX8 325 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 EEF1AKMT1Q8WVE0 214 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 TWIST2Q8WVJ9 160 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 OLFM1Q99784 485 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 SEZ6LQ9BYH1 1024 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 FBRSL1Q9HCM7 1045 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 VCX3AQ9NNX9 186 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 POLG2Q9UHN1 485 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 ORC6Q9Y5N6 252 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 EVPLLA8MZ36 301 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 PIP5K1BO14986 540 aa7.08□□□□□ -1.28
TGFBR3-202ENST00000370399 FKBP6O75344 327 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms