RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CER1O95813 267 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 ENGP17813 658 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 ITGALP20701 1170 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 MC4RP32245 332 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 PLTPP55058 493 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 PRAMEP78395 509 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 BNC1Q01954 994 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 DHX9Q08211 1270 aaKnown RBP15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 ATP13A5Q4VNC0 1218 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 AFTPHQ6ULP2 937 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 KDM7AQ6ZMT4 941 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 CENPUQ71F23 418 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 TMEM135Q86UB9 458 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 SPATS2Q86XZ4 545 aaKnown RBP15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 MPP5Q8N3R9 675 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 OR56A4Q8NGH8 313 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 ULK4Q96C45 1275 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 TBATAQ96M53 351 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 ZNF778Q96MU6 729 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 EBNA1BP2Q99848 306 aaKnown RBP15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 LGR4Q9BXB1 951 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 SMOC1Q9H4F8 434 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 ASB8Q9H765 288 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 VPS18Q9P253 973 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 CNOT6Q9ULM6 557 aaKnown RBP15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 MAD1L1Q9Y6D9 718 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 DOCK9Q9BZ29 2069 aa15.42■□□□□ 0.06
PRPF38B-202ENST00000370022 PIEZO1Q92508 2521 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ESYT3A0FGR9 886 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 LNP1A1A4G5 178 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 CCDC78A2IDD5 438 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 GPR89AB7ZAQ6 455 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 E7ESA3 106 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 INPP4BO15327 924 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 EIF3HO15372 352 aaKnown RBP eCLIP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 YKT6O15498 198 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 USP1O94782 785 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 SLC25A14O95258 325 aaPredicted RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 SLU7O95391 586 aaKnown RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TTC4O95801 387 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 POLBP06746 335 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 GPR89BP0CG08 455 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 PGAM1P18669 254 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TGM1P22735 817 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ARRB1P49407 418 aaPredicted RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ATXN3P54252 364 aaPredicted RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 CACNG1Q06432 222 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 FZD2Q14332 565 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ZNF423Q2M1K9 1284 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 BBS9Q3SYG4 887 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 LDLRAP1Q5SW96 308 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ENPP7Q6UWV6 458 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 PRR23CQ6ZRP0 262 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 IFT20Q8IY31 132 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 FBXO25Q8TCJ0 367 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 HDAC10Q969S8 669 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 MFSD3Q96ES6 412 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ELF4Q99607 663 aaPredicted RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TSPYL1Q9H0U9 437 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TRIM39Q9HCM9 518 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 PARD6AQ9NPB6 346 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 SLC2A6Q9UGQ3 507 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 RPS6KL1Q9Y6S9 549 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ZNF106Q9H2Y7 1883 aaKnown RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 RRP9O43818 475 aaKnown RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 GFRA3O60609 400 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 CSF2P04141 144 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 NMBRP28336 390 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 RXRGP48443 463 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 BLKP51451 505 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ARSDP51689 593 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 CUL1Q13616 776 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TRADDQ15628 312 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 HLA-BQ31612 363 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 MSS51Q4VC12 460 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TPRG1LQ5T0D9 272 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 KIAA0930Q6ICG6 404 aaPredicted RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TCEAL6Q6IPX3 200 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ZDHHC24Q6UX98 284 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 CEP128Q6ZU80 1094 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 AGGF1Q8N302 714 aaeCLIP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 DCLK2Q8N568 766 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 DDHD1Q8NEL9 900 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 OR6P1Q8NGX9 317 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 OR4L1Q8NH43 312 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 HEXDCQ8WVB3 486 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TCEAL3Q969E4 200 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.41■□□□□ 0.067e-8■■■■□ 26.2
PRPF38B-202ENST00000370022 TTC1Q99614 292 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ZCCHC2Q9C0B9 1178 aaKnown RBP15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 RMI1Q9H9A7 625 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 ZDHHC18Q9NUE0 388 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 KLQ9UEF7 1012 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 CRLS1Q9UJA2 301 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 SLC17A4Q9Y2C5 497 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 DGKBQ9Y6T7 804 aa15.41■□□□□ 0.06
PRPF38B-202ENST00000370022 SDK1Q7Z5N4 2213 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 MYLKQ15746 1914 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 TRBV5-4A0A0C4DH59 114 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 CCDC162PA2VCL2 907 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms