RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 HOPXQ9BPY8 73 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 GORASP1Q9BQQ3 440 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 HEPHQ9BQS7 1158 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 POPDC3Q9HBV1 291 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 WASH4PA8MWX3 477 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ANKRD66B4E2M5 251 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 COCHO43405 550 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 NRP2O60462 931 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 DEAF1O75398 565 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 FGF18O76093 207 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 FESP07332 822 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PCNAP12004 261 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 HOXB6P17509 224 aaKnown RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 IMPDH1P20839 514 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 NSG1P42857 185 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 GPR1P46091 355 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CLCQ05315 142 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 TGM3Q08188 693 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CYP2A13Q16696 494 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PGS1Q32NB8 556 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 INO80DQ53TQ3 878 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 RTP2Q5QGT7 225 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PIK3R6Q5UE93 754 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 TRNP1Q6NT89 227 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 KLHDC10Q6PID8 442 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC39A5Q6ZMH5 540 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PAQR9Q6ZVX9 377 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 SNX20Q7Z614 316 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 HORMAD1Q86X24 394 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 TAGAPQ8N103 731 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 FBXW8Q8N3Y1 598 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 TTC30BQ8N4P2 665 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 NPWQ8N729 165 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 SH3RF2Q8TEC5 729 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 GDPD5Q8WTR4 605 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 OTUB1Q96FW1 271 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 BDH2Q9BUT1 245 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 UGT2B28Q9BY64 529 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM83DQ9H4H8 585 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 C6orf203Q9P0P8 240 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 NCKAP1Q9Y2A7 1128 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ARL5AQ9Y689 179 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 TNS1Q9HBL0 1735 aaKnown RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ATAD5Q96QE3 1844 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 A0A1W2PRU2 124 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 NPEPPSL1A6NEC2 478 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CCL22O00626 93 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 TPST1O60507 370 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 KCNH1O95259 989 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CLPTM1O96005 669 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ITGB1P05556 798 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ACRP10323 421 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ACADMP11310 421 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ETS2P15036 469 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ALOX15P16050 662 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PSMC3P17980 439 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CXCR2P25025 360 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 XIAPP98170 497 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CYP4F8P98187 520 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PLOD1Q02809 727 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 MGAT3Q09327 533 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 NIPAL4Q0D2K0 466 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CNTN1Q12860 1018 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 TXNDC8Q6A555 127 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ARHGAP36Q6ZRI8 547 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 SCD5Q86SK9 330 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 SERPINA9Q86WD7 417 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CILP2Q8IUL8 1156 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CPA6Q8N4T0 437 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PCDH20Q8N6Y1 951 aaKnown RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PHC3Q8NDX5 983 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 CYGBQ8WWM9 190 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 NT5C3BQ969T7 300 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PTCD3Q96EY7 689 aaKnown RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 MPP4Q96JB8 637 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 VPS50Q96JG6 964 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 HERC2P3Q9BVR0 1158 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 OSBPL6Q9BZF3 934 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF556Q9HAH1 456 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 POLR3BQ9NW08 1133 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC17A6Q9P2U8 582 aa5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 STX18Q9P2W9 335 aaKnown RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 PAIP2BQ9ULR5 123 aaKnown RBP5.29□□□□□ -1.56
SMNDC1-202ENST00000369603 EME2A4GXA9 379 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 STK25O00506 426 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 IL1BP01584 269 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 UROSP10746 265 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PABPC1P11940 636 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF23P17027 643 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 TSPAN8P19075 237 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 HPCAL1P37235 193 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 RPL3P39023 403 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 VEGFBP49765 207 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 HERVK_113P63132 956 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 CAP1Q01518 475 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 DSC1Q08554 894 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 RAB33AQ14088 237 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 CARD16Q5EG05 197 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 MBLAC2Q68D91 279 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms