RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CNBD2Q96M20 576 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 TBATAQ96M53 351 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 PRPF18Q99633 342 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 FAM96AQ9H5X1 160 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 COG4Q9H9E3 785 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 SCUBE2Q9NQ36 999 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 EVLQ9UI08 416 aaPredicted RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 CRYL1Q9Y2S2 319 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 FIS1Q9Y3D6 152 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 HTR3EA5X5Y0 456 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 CFLARO15519 480 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 SERPINF2P08697 491 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 ALPIP09923 528 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 GABRB3P28472 473 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 PMLP29590 882 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 ARRB2P32121 409 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 HTR7P34969 479 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 YBEYP58557 167 aaPredicted RBP10.63□□□□□ -0.71
TPM3-212ENST00000368533 ACTR3P61158 418 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 PHEXP78562 749 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 LMAN2Q12907 356 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 GRM3Q14832 879 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 UGT2A3Q6UWM9 527 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 LINC00523Q86TU6 105 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 RAVER1Q8IY67 606 aaKnown RBP10.63□□□□□ -0.71
TPM3-212ENST00000368533 CCNYL1Q8N7R7 359 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 CMTM5Q96DZ9 223 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 RBBP8Q99708 897 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 MAGEH1Q9H213 219 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 ABCG8Q9H221 673 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 MTIF3Q9H2K0 278 aaKnown RBP10.63□□□□□ -0.71
TPM3-212ENST00000368533 SELENONQ9NZV5 590 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 MRPS23Q9Y3D9 190 aaKnown RBP10.63□□□□□ -0.71
TPM3-212ENST00000368533 TCAF1Q9Y4C2 921 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 PCDHB9Q9Y5E1 797 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 SPO11Q9Y5K1 396 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 GSTT2P0CG29 244 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 GSTT2BP0CG30 244 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 SLC1A2P43004 574 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 ENTPD1P49961 510 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 ATXN3P54252 364 aaPredicted RBP10.63□□□□□ -0.71
TPM3-212ENST00000368533 CDK18Q07002 472 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 TCEAL5Q5H9L2 206 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 PCID2Q5JVF3 399 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 CYS1Q717R9 158 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 MAVSQ7Z434 540 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 DHDDSQ86SQ9 333 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 SLC7A5P1Q8MH63 180 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 FNDC8Q8TC99 324 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
TPM3-212ENST00000368533 GIPC3Q8TF64 312 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 SGF29Q96ES7 293 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 LRRC3BQ96PB8 259 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 SORT1Q99523 831 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 BBS2Q9BXC9 721 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 WDR55Q9H6Y2 383 aaPredicted RBP10.63□□□□□ -0.71
TPM3-212ENST00000368533 NMRAL1Q9HBL8 299 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 MARCH4Q9P2E8 410 aaPredicted RBP10.63□□□□□ -0.71
TPM3-212ENST00000368533 TMEM98Q9Y2Y6 226 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 OBSL1O75147 1896 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 GBF1Q92538 1859 aa10.63□□□□□ -0.71
TPM3-212ENST00000368533 ERI2A8K979 691 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 KDELR3O43731 214 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 TRIM13O60858 407 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 AHSGP02765 367 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 PTPN2P17706 415 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 AOC1P19801 751 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 CCR10P46092 362 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 NPY2RP49146 381 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 CCDC153Q494R4 210 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 FAM91A1Q658Y4 838 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 PPP2R2DQ66LE6 453 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 CNSTQ6PJW8 725 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 ATG14Q6ZNE5 492 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 HJURPQ8NCD3 748 aaPredicted RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 CYB5D2Q8WUJ1 264 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 LZICQ8WZA0 190 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 SMG7Q92540 1137 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 TMIGD2Q96BF3 282 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 VPS39Q96JC1 886 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 INTS6Q9UL03 887 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 PLA2G4CQ9UP65 541 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 SSX2IPQ9Y2D8 614 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 A0A088AWK7 358 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 F8W8V4 182 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 TRMUO75648 421 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 ATXN1LP0C7T5 689 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 HLA-FP30511 346 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 CDKN1CP49918 316 aaPredicted RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 LIMK2P53671 638 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 PRAMEP78395 509 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 MESP2Q0VG99 397 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 NAB1Q13506 487 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 SLC9B1Q4ZJI4 515 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 LY6G5CQ5SRR4 150 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 RBM20Q5T481 1227 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 NAPRTQ6XQN6 538 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 GET4Q7L5D6 327 aaPredicted RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 HPS6Q86YV9 775 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms