RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PHPT1Q9NRX4 125 aaPredicted RBP13.81□□□□□ -0.2
TPM3-211ENST00000368531 SEMA4GQ9NTN9 838 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 SOX13Q9UN79 622 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 TMEM98Q9Y2Y6 226 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 SLC30A1Q9Y6M5 507 aa13.81□□□□□ -0.2
TPM3-211ENST00000368531 GAPDHSO14556 408 aaPredicted RBP13.8□□□□□ -0.2
TPM3-211ENST00000368531 MAGEC1O60732 1142 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 SLC25A14O95258 325 aaPredicted RBP13.8□□□□□ -0.2
TPM3-211ENST00000368531 PYGLP06737 847 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 ZNF806P0C7X5 589 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 PRSS56P0CW18 603 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 CA5AP35218 305 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 TRIM23P36406 574 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 ELK3P41970 407 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 POLD2P49005 469 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 CDKN1CP49918 316 aaPredicted RBP13.8□□□□□ -0.2
TPM3-211ENST00000368531 NXPH1P58417 271 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 YPEL5P62699 121 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 XIAPP98170 497 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 CAV1Q03135 178 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 GRIK2Q13002 908 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 PEX6Q13608 980 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 NFATC4Q14934 902 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 ADAMTSL4Q6UY14 1074 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 TAS2R42Q7RTR8 314 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 RD3Q7Z3Z2 195 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 IQCHQ86VS3 1027 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 NLRP8Q86W28 1048 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 IGDCC3Q8IVU1 814 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 OR13J1Q8NGT2 312 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 FAM174AQ8TBP5 190 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 CFAP36Q96G28 342 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 KIFC1Q9BW19 673 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 TEX101Q9BY14 249 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 FRMD8Q9BZ67 464 aaPredicted RBP13.8□□□□□ -0.2
TPM3-211ENST00000368531 GDF3Q9NR23 364 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 FAM114A2Q9NRY5 505 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 NFKBIL1Q9UBC1 381 aaPredicted RBP13.8□□□□□ -0.2
TPM3-211ENST00000368531 APPL1Q9UKG1 709 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 TMPRSS11EQ9UL52 423 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 CNOT6Q9ULM6 557 aaKnown RBP13.8□□□□□ -0.2
TPM3-211ENST00000368531 CHMP2BQ9UQN3 213 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 RPS6KL1Q9Y6S9 549 aa13.8□□□□□ -0.2
TPM3-211ENST00000368531 TMEM202A6NGA9 273 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 ARHGAP33O14559 1287 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 MTX2O75431 263 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 GOT2P00505 430 aaKnown RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 SYPP08247 313 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 MYCLP1P12525 358 aaPredicted RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 ENGP17813 658 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 ITGALP20701 1170 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 HTR1BP28222 390 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 OVGP1Q12889 678 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 ITGA9Q13797 1035 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 PTK2BQ14289 1009 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 FZD2Q14332 565 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 TCEA2Q15560 299 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 ANKRD20A4Q4UJ75 823 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 CENPUQ71F23 418 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 MARK2Q7KZI7 788 aaKnown RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 OTUD6BQ8N6M0 293 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 PNPLA1Q8N8W4 532 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 PTCD2Q8WV60 388 aaKnown RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 BTN2A2Q8WVV5 523 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 GLYATL1Q969I3 302 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 TSACCQ96A04 125 aaPredicted RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 WDR92Q96MX6 357 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 FCRL3Q96P31 734 aaPredicted RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 MRM3Q9HC36 420 aaKnown RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 SAYSD1Q9NPB0 183 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 MRPL40Q9NQ50 206 aaKnown RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 TREX1Q9NSU2 369 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 DNAJC28Q9NX36 388 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 IL1RAPL1Q9NZN1 696 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 CRLS1Q9UJA2 301 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 OAS3Q9Y6K5 1087 aaKnown RBP13.79□□□□□ -0.2
TPM3-211ENST00000368531 PCDH15Q96QU1 1955 aa13.79□□□□□ -0.2
TPM3-211ENST00000368531 SPTY2D1-AS1A0A0U1RR47 76 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 FAM237BA0A1B0GVD1 139 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 MAGEB16A2A368 324 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 BHMG1C9JSJ3 638 aaPredicted RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 GOLGA8KD6RF30 607 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 GOLGA8TH3BQL2 631 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 TOR1BO14657 336 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 GFRA3O60609 400 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 VAPBO95292 243 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 TEAD1P28347 426 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 CTSKP43235 329 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 CARSP49589 748 aaKnown RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 ATXN3P54252 364 aaPredicted RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 KIAA1024LP59773 190 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 IL9RQ01113 521 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 EIF2B5Q13144 721 aaKnown RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 NFATC2Q13469 925 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 FASTKD3Q14CZ7 662 aaKnown RBP13.78□□□□□ -0.2
TPM3-211ENST00000368531 CSRP2Q16527 193 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 HLA-BQ31612 363 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 KCTD16Q68DU8 428 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 MACC1Q6ZN28 852 aa13.78□□□□□ -0.2
TPM3-211ENST00000368531 CAPN12Q6ZSI9 719 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms