RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CMTM6Q9NX76 183 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 EIF2B4Q9UI10 523 aaKnown RBP10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 ORC6Q9Y5N6 252 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 A0A1B0GTL3 188 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 FKBP9O95302 570 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 MADCAM1Q13477 382 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 MEP1AQ16819 746 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 ZBED5Q49AG3 693 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 UNC50Q53HI1 259 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 ALFQ53S48 1182 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 FKBP9P1Q75LS8 142 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 HEATR4Q86WZ0 1026 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 CPSF7Q8N684 471 aaKnown RBP10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 OR4K2Q8NGD2 314 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 CCDC97Q96F63 343 aaPredicted RBP10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 PLEKHA8Q96JA3 519 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 ROGDIQ9GZN7 287 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 MIR1-1HGQ9H1L0 117 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 RIBC2Q9H4K1 309 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 RERGLQ9H628 205 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 RASSF1Q9NS23 344 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 IGSF5Q9NSI5 407 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 TMLHEQ9NVH6 421 aa10.98□□□□□ -0.65
NECTIN4-201ENST00000368012 C17orf102A2RUQ5 167 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 SLC22A3O75751 556 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 DIRAS1O95057 198 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 LRATO95237 230 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 IMPDH1P20839 514 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ARNTP27540 789 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 MTHFRP42898 656 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TBX4P57082 545 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 FPGSQ05932 587 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 RAD51Q06609 339 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ACAP2Q15057 778 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 PAGE3Q5JUK9 113 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ANKRD34AQ69YU3 496 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 FUNDC1Q8IVP5 155 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ATAD1Q8NBU5 361 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 FAM193BQ96PV7 902 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 GPATCH1Q9BRR8 931 aaKnown RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TRMT6Q9UJA5 497 aaKnown RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 PCDHGC4Q9Y5F7 938 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 PTGESO14684 152 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 RAMP2O60895 175 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 SNAI1O95863 264 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 CST1P01037 141 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 S100BP04271 92 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 CCNCP24863 283 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 SEPHS1P49903 392 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 DNASE1L3Q13609 305 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 DDX39BQ13838 428 aaKnown RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 OR4D1Q15615 310 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 CYP2A13Q16696 494 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ZNF678Q5SXM1 525 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 KCTD11Q693B1 232 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TIGD7Q6NT04 549 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 MICU2Q8IYU8 434 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 OR10A6Q8NH74 314 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 GIPC2Q8TF65 315 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 SEPT8Q92599 483 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 PRKD2Q9BZL6 878 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 AMBNQ9NP70 447 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 CATSPERZQ9NTU4 200 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 POLG2Q9UHN1 485 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TMA7Q9Y2S6 64 aaKnown RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 POLR3HQ9Y535 204 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 PTPRFP10586 1907 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 LSM1O15116 133 aaKnown RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 MAFKO60675 156 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 NIPSNAP2O75323 286 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ESRRBO95718 433 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 FTH1P02794 183 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ODC1P11926 461 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ACVRL1P37023 503 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 HALP42357 657 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 CDKN1CP49918 316 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 CLCN2P51788 898 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 OR4D2P58180 307 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 RPL38P63173 70 aaKnown RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 RGS21Q2M5E4 152 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 C18orf21Q32NC0 220 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 AASDHQ4L235 1098 aaPredicted RBP10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TMTC4Q5T4D3 741 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TAF2Q6P1X5 1199 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 C16orf59Q7L2K0 433 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ISCA2Q86U28 154 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TOP6BLQ8N6T0 577 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TEX37Q96LM6 180 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 FCRL5Q96RD9 977 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 ZBTB18Q99592 522 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 VTA1Q9NP79 307 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 PRDM8Q9NQV8 689 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 FAM105AQ9NUU6 356 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TAS2R13Q9NYV9 303 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 VPS51Q9UID3 782 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 PKP3Q9Y446 797 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 SLC30A1Q9Y6M5 507 aa10.97□□□□□ -0.65
NECTIN4-201ENST00000368012 TLR5O60602 858 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms