RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ZKSCAN4Q969J2 545 aaPredicted RBP4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 RRNAD1Q96FB5 475 aaKnown RBP4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 TMEM68Q96MH6 324 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 ZNF583Q96ND8 569 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 UHRF2Q96PU4 802 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 RANBP17Q9H2T7 1088 aaKnown RBP4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 JMJD4Q9H9V9 463 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 RANGRFQ9HD47 186 aaPredicted RBP4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 FAM237BA0A1B0GVD1 139 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 A0A1W2PQF6 199 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 A0A1W2PS18 150 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 CCDC189A1A4V9 331 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 M0QZ24 198 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 SEC14L2O76054 403 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 APOBEC1P41238 236 aaKnown RBP4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 CLDN20P56880 219 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 RPL7AP62424 266 aaKnown RBP4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 CCNG2Q16589 344 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 DECR1Q16698 335 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 DCST1Q5T197 706 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 FRG2Q64ET8 278 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 C19orf48Q6RUI8 117 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 CYP20A1Q6UW02 462 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 GPR180Q86V85 440 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 KLHDC8BQ8IXV7 354 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 QRFPRQ96P65 431 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 SLC26A6Q9BXS9 759 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 PDCL3Q9H2J4 239 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 DLGAP2Q9P1A6 1054 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 COPG2Q9UBF2 871 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 OR14J1Q9UGF5 321 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 ERRFI1Q9UJM3 462 aaPredicted RBP4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 FBXL2Q9UKC9 423 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 ACSL5Q9ULC5 683 aa4.37□□□□□ -1.71
RNU4-28P-201ENST00000364739 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 CYSRT1A8MQ03 144 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 H3BQ06 376 aaPredicted RBP4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 DVL1O14640 695 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 WDR1O75083 606 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 RTN3O95197 1032 aaPredicted RBP4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 NR1D1P20393 614 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 DVL1P1P54792 670 aaPredicted RBP4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 ZNF234Q14588 700 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 MED22Q15528 200 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 DPCR1Q3MIW9 517 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 ACCSLQ4AC99 568 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 TMEM35AQ53FP2 167 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 LRIF1Q5T3J3 769 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 INTS11Q5TA45 600 aaKnown RBP4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 TTI2Q6NXR4 508 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 CACNA2D4Q7Z3S7 1137 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 TAAR8Q969N4 342 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 HARBI1Q96MB7 349 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 STRA6Q9BX79 667 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 PIGMQ9H3S5 423 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 ZNF334Q9HCZ1 680 aaPredicted RBP4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 LTB4R2Q9NPC1 389 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 R3HDM2Q9Y2K5 976 aaKnown RBP4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 CLIC4Q9Y696 253 aa4.36□□□□□ -1.71
RNU4-28P-201ENST00000364739 FAM172BPA6NC97 362 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 ATP2A1O14983 1001 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 ANKRD28O15084 1053 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 ZNHIT1O43257 154 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 CFC1BP0CG36 223 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 CFC1P0CG37 223 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 POLR2CP19387 275 aaPredicted RBP4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 RPS3AP61247 264 aaKnown RBP4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 RUNX1T1Q06455 604 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 PLA2G4FQ68DD2 849 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 CPLX4Q7Z7G2 160 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 PCYOX1LQ8NBM8 494 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 OR52I2Q8NH67 350 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 RFFLQ8WZ73 363 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 LINGO1Q96FE5 620 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 NEUROD6Q96NK8 337 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 SCRT2Q9NQ03 307 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 DLGAP4Q9Y2H0 992 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 KCNE2Q9Y6J6 123 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 PIAS3Q9Y6X2 628 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 MAU2Q9Y6X3 613 aa4.35□□□□□ -1.71
RNU4-28P-201ENST00000364739 FAM90A26D6RGX4 464 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 JRKO75564 520 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 AMBPP02760 352 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 FGF5P12034 268 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 ELF1P32519 619 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 TIMP3P35625 211 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 CSTF3Q12996 717 aaKnown RBP4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 MAD2L1Q13257 205 aaPredicted RBP4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 RBM39Q14498 530 aaKnown RBP4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 ALFQ53S48 1182 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 SIRPB2Q5JXA9 342 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 PDSS1Q5T2R2 415 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 NSUN5P2Q63ZY6 315 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 ATG9AQ7Z3C6 839 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 SDCCAG8Q86SQ7 713 aaPredicted RBP4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 NFE4Q86UQ8 179 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 ADSSL1Q8N142 457 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 ETNPPLQ8TBG4 499 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 HM13Q8TCT9 377 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms