RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CYTH1Q15438 398 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 SPATS1Q496A3 300 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 NHSL2Q5HYW2 709 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 PRMT9Q6P2P2 845 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 NUP93Q8N1F7 819 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 TTC9BQ8N6N2 239 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 NKX2-4Q9H2Z4 354 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 CRISPLD1Q9H336 500 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 CIDEBQ9UHD4 219 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 MAFFQ9ULX9 164 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 SLC27A5Q9Y2P5 690 aa12.37□□□□□ -0.43
UBA3-202ENST00000361055 MTCL1Q9Y4B5 1905 aaKnown RBP12.37□□□□□ -0.43
UBA3-202ENST00000361055 MYOCOSA0A1B0GUC4 107 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 AQP12BA6NM10 295 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 E9PAM4 449 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 H3BNC9 293 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 TNFRSF10BO14763 440 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 HNRNPRO43390 633 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 SUPT7LO94864 414 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 BMP10O95393 424 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CNPP09543 421 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 HOXB8P17481 243 aaPredicted RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 NDST2P52849 883 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 PLK1P53350 603 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 HERVK_113P63132 956 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 DDR2Q16832 855 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 MAP7D1Q3KQU3 841 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 MTX3Q5HYI7 312 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 PPP2R2DQ66LE6 453 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 TMEM207Q6UWW9 146 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CYP2R1Q6VVX0 501 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 RPS27LQ71UM5 84 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 ERMP1Q7Z2K6 904 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 AQP12AQ8IXF9 295 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 UMODL1-AS1Q8N2C9 162 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 MINDY1Q8N5J2 469 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 MRPL43Q8N983 215 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 MFSD2AQ8NA29 543 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 OR13J1Q8NGT2 312 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 SCAMP5Q8TAC9 235 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 LZICQ8WZA0 190 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 TFAP2CQ92754 450 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CYP2S1Q96SQ9 504 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 TCF12Q99081 682 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 SEPT5Q99719 369 aaPredicted RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 ERVK-6Q9BXR3 956 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 EMILIN2Q9BXX0 1053 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CLK4Q9HAZ1 481 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 TUBA8Q9NY65 449 aaPredicted RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 RSL24D1Q9UHA3 163 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 CNOT6Q9ULM6 557 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 SHROOM3Q8TF72 1996 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 GRM6O15303 877 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 ADH1AP07327 375 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CDK4P11802 303 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 YWHAQP27348 245 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 PLXNA3P51805 1871 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 SLC7A2P52569 658 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 SLC5A3P53794 718 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 GPM6BQ13491 265 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 PCSK7Q16549 785 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 INTS11Q5TA45 600 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 KRT80Q6KB66 452 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 PDE12Q6L8Q7 609 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 LAYNQ6UX15 382 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 C14orf80Q86SX3 495 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 MYO1HQ8N1T3 1032 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CASP10Q92851 521 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 GFM2Q969S9 779 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 PPWD1Q96BP3 646 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 C19orf60Q96EN9 201 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 RMND5BQ96G75 393 aaPredicted RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 DNAJC1Q96KC8 554 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 SPATA17Q96L03 361 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CEP295NLQ96MC4 621 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CIB1Q99828 191 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 TRIM15Q9C019 465 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 ALG9Q9H6U8 611 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 CAAP1Q9H8G2 361 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 AKTIPQ9H8T0 292 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 SLC28A3Q9HAS3 691 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 DDX18Q9NVP1 670 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 DUS2Q9NX74 493 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 MAP10Q9P2G4 905 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 SFMBT1Q9UHJ3 866 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 PTBP2Q9UKA9 531 aaKnown RBP12.36□□□□□ -0.43
UBA3-202ENST00000361055 HS3ST4Q9Y661 456 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 LAMA3Q16787 3333 aa12.36□□□□□ -0.43
UBA3-202ENST00000361055 TRIM64CA6NLI5 447 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 HSD17B1P14061 328 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 ARSAP15289 507 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 GPR15P49685 360 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 CDKN2DP55273 166 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 TNK2Q07912 1038 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 CAMK1Q14012 370 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 GPR158Q5T848 1215 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 MARC1Q5VT66 337 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 PLPP4Q5VZY2 271 aa12.35□□□□□ -0.43
UBA3-202ENST00000361055 CLEC6AQ6EIG7 209 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms