RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ATP13A3Q9H7F0 1226 aa18.19■□□□□ 0.5
PDLIM7-203ENST00000359895 EVLQ9UI08 416 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-203ENST00000359895 FIS1Q9Y3D6 152 aa18.19■□□□□ 0.5
PDLIM7-203ENST00000359895 LRRC42Q9Y546 428 aa18.19■□□□□ 0.5
PDLIM7-203ENST00000359895 A0A0J9YYE9 177 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 SUPT3HB4E1H0 165 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 K7ERQ8 282 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 UBFD1O14562 309 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 SUPT3HO75486 399 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 TRBC1P01850 177 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 FGBP02675 491 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 IL2P60568 153 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 PPIGQ13427 754 aaKnown RBP eCLIP18.18■□□□□ 0.57e-7■■■□□ 17.5
PDLIM7-203ENST00000359895 PFKFB4Q16877 469 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 CMPK2Q5EBM0 449 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 CTSL3PQ5NE16 218 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 TMEM198Q66K66 360 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 TLDC1Q6P9B6 456 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 TXNDC11Q6PKC3 985 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 TPGS1Q6ZTW0 290 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 CAMK1DQ8IU85 385 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 SPNS2Q8IVW8 549 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 FBXW8Q8N3Y1 598 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 SLC46A2Q9BY10 475 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 EFCAB1Q9HAE3 211 aa18.18■□□□□ 0.5
PDLIM7-203ENST00000359895 E5RI56 91 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 STX16-NPEPL1H3BU86 382 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 STX16O14662 325 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 AIM2O14862 343 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 UBDO15205 165 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 SMAD6O43541 496 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 GPC4O75487 556 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 CTPS1P17812 591 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 SERPINA4P29622 427 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 NUDT2P50583 147 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 ATP4BP51164 291 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 MTTPP55157 894 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 SNRPD1P62314 119 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 LYPLAL1Q5VWZ2 237 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 RPS27LQ71UM5 84 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 PAF1Q8N7H5 531 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 ISG20Q96AZ6 181 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 FAM136AQ96C01 138 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 TCF25Q9BQ70 676 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 C1QTNF3Q9BXJ4 246 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 P2RY12Q9H244 342 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 ZFYVE1Q9HBF4 777 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 TNFRSF12AQ9NP84 129 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 APPL1Q9UKG1 709 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 SOBPA7XYQ1 873 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 PRMT5O14744 637 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 CCL16O15467 120 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 KLK8O60259 260 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 NIPSNAP2O75323 286 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 TBX10O75333 385 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 ECI2O75521 394 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 ALPIP09923 528 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 RPS3P23396 243 aaKnown RBP eCLIP18.17■□□□□ 0.59e-7■□□□□ 8.9
PDLIM7-203ENST00000359895 CD70P32970 193 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 TAF11Q15544 211 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 ANKS6Q68DC2 871 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 LRRC74BQ6ZQY2 392 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 DSELQ8IZU8 1212 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 ZNF557Q8N988 423 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 PPFIBP2Q8ND30 876 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 OR2AP1Q8NGE2 309 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 CD200R1Q8TD46 325 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 ALPK3Q96L96 1907 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 TUBGCP5Q96RT8 1024 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 PLK2Q9NYY3 685 aa18.17■□□□□ 0.5
PDLIM7-203ENST00000359895 CAPN8A6NHC0 703 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 BTN3A1O00481 513 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 AZIN1O14977 448 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 OR1I1O60431 355 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 CLASP2O75122 1294 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 CDK14O94921 469 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 ZNF7P17097 686 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 GJA1P17302 382 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 CHRM3P20309 590 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 ITGALP20701 1170 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 EPHA5P54756 1037 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 PTPN5P54829 565 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 SESN3P58005 492 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 IRX1P78414 480 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 STX5Q13190 355 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 TSNQ15631 228 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 ARHGAP15Q53QZ3 475 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 PITRM1Q5JRX3 1037 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 SNX20Q7Z614 316 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 PGAM4Q8N0Y7 254 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 CBARPQ8N350 705 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 SIDT2Q8NBJ9 832 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 GRIN3AQ8TCU5 1115 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 FUBP1Q96AE4 644 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 RCN3Q96D15 328 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 C19orf60Q96EN9 201 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 PDLIM5Q96HC4 596 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 LMLNQ96KR4 655 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 MID1IP1Q9NPA3 183 aa18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 CLEC4EQ9ULY5 219 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms