RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 GSRP00390 522 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 PFKPQ01813 784 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 ADGRE1Q14246 886 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 DSC3Q14574 896 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 CAMK1DQ8IU85 385 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 RPL10LQ96L21 214 aaKnown RBP11.13□□□□□ -0.63
SSU72-202ENST00000359060 PKP2Q99959 881 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 AARSD1Q9BTE6 412 aaKnown RBP11.13□□□□□ -0.63
SSU72-202ENST00000359060 TBCDQ9BTW9 1192 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 ADNPQ9H2P0 1102 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 TREX1Q9NSU2 369 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 POLG2Q9UHN1 485 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 PARP14Q460N5 1801 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 SEC22BO75396 215 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 ALPIP09923 528 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 OGNP20774 298 aaKnown RBP11.13□□□□□ -0.63
SSU72-202ENST00000359060 CES1P23141 567 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 GABRR2P28476 465 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 STC1P52823 247 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 ZNF678Q5SXM1 525 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 DET1Q7L5Y6 550 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 STK40Q8N2I9 435 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 NSMCE2Q96MF7 247 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 TRIM8Q9BZR9 551 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 IGSF5Q9NSI5 407 aa11.13□□□□□ -0.63
SSU72-202ENST00000359060 B4GALT3O60512 393 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 SH3BGRLO75368 114 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 ECI2O75521 394 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 IDO1P14902 403 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 ZNF37AP17032 561 aaPredicted RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 MGAT3Q09327 533 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 TUBB3Q13509 450 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 ADGRF1Q5T601 910 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 RTN4RL1Q86UN2 441 aaPredicted RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 OR13J1Q8NGT2 312 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 FIG4Q92562 907 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 FAM162AQ96A26 154 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 PPM1MQ96MI6 270 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 GORASP1Q9BQQ3 440 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 CCDC90BQ9GZT6 254 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 DDX18Q9NVP1 670 aaKnown RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 OPTCQ9UBM4 332 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 LZTS1Q9Y250 596 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 DHRS12A0PJE2 317 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 PPP6CO00743 305 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 OR1I1O60431 355 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 CNPP09543 421 aaKnown RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 ARNTP27540 789 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 PRMT9Q6P2P2 845 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 ISCA2Q86U28 154 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 HJURPQ8NCD3 748 aaPredicted RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 ADCY4Q8NFM4 1077 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 HIC2Q96JB3 615 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 FAM126AQ9BYI3 521 aaPredicted RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 DPY30Q9C005 99 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 TMEM39AQ9NV64 488 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 WARS2Q9UGM6 360 aaKnown RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 RNASEH1O60930 286 aaKnown RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 VPS4BO75351 444 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 IGSF6O95976 241 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 CKMT2P17540 419 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 CTGFP29279 349 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 ADRA1AP35348 466 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 HSPA7P48741 367 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 AGTR2P50052 363 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 DNAJB13P59910 316 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 RPL38P63173 70 aaKnown RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 SATB1Q01826 763 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 PRKG2Q13237 762 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 TAF1AQ15573 450 aaPredicted RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 ACBD5Q5T8D3 534 aaPredicted RBP11.12□□□□□ -0.63
SSU72-202ENST00000359060 CACHD1Q5VU97 1274 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 BHLHA9Q7RTU4 235 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 PDSS2Q86YH6 399 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 CLDN19Q8N6F1 224 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 GRIN3AQ8TCU5 1115 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 SNX19Q92543 992 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 MYO19Q96H55 970 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 SH3GL3Q99963 347 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 CIPCQ9C0C6 399 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 CACNA2D2Q9NY47 1150 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 CPQQ9Y646 472 aa11.12□□□□□ -0.63
SSU72-202ENST00000359060 COCHO43405 550 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 SLC22A3O75751 556 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 PRAMEF1O95521 474 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 LINGO3P0C6S8 592 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 PCNAP12004 261 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 UGT1A6P19224 532 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 UGT1A1P22309 533 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 UGT1A4P22310 534 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 UGT1A3P35503 534 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 UGT1A5P35504 534 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 XIAPP98170 497 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 MS4A2Q01362 244 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 HERC3Q15034 1050 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 CPSF6Q16630 551 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms