RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 OSBPL11Q9BXB4 747 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 PCDHB8Q9UN66 801 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 RAI2Q9Y5P3 530 aa12.21□□□□□ -0.45
COL20A1-201ENST00000358894 TAF4O00268 1085 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 SLC22A3O75751 556 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 C1RP00736 705 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 PBLDP30039 288 aaPredicted RBP12.21□□□□□ -0.46
COL20A1-201ENST00000358894 MAGEA6P43360 314 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 GSSP48637 474 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 NDST2P52849 883 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 SIRPB2Q5JXA9 342 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 UBXN11Q5T124 520 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 THOC7Q6I9Y2 204 aaKnown RBP12.21□□□□□ -0.46
COL20A1-201ENST00000358894 PAQR3Q6TCH7 311 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 CPNE9Q8IYJ1 553 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 CBR4Q8N4T8 237 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 ACVR1CQ8NER5 493 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 TNIP2Q8NFZ5 429 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 GLMNQ92990 594 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 OMA1Q96E52 524 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 BTBD9Q96Q07 612 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 WDR6Q9NNW5 1121 aaKnown RBP12.21□□□□□ -0.46
COL20A1-201ENST00000358894 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 ADAMTS6Q9UKP5 1117 aa12.21□□□□□ -0.46
COL20A1-201ENST00000358894 NCK1P16333 377 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 EPHB3P54753 998 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 MTA1Q13330 715 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 NR1D2Q14995 579 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 ZBTB6Q15916 424 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 RNF19BQ6ZMZ0 732 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 ZDHHC13Q8IUH4 622 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 ZNF276Q8N554 614 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 OR2T34Q8NGX1 318 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 OR2T3Q8NH03 318 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 SH3KBP1Q96B97 665 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 PKP2Q99959 881 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 FAM126AQ9BYI3 521 aaPredicted RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 SMOC2Q9H3U7 446 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 TLE6Q9H808 572 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 ZBTB26Q9HCK0 441 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 TLL2Q9Y6L7 1015 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 ZFP37Q9Y6Q3 630 aaPredicted RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 MYADML2A6NDP7 307 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 OR6C75A6NL08 312 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 AURKAO14965 403 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 ARHGEF9O43307 516 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 HS6ST1O60243 411 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 MAGP20916 626 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 HTR7P34969 479 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 PLCL1Q15111 1095 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 CRY1Q16526 586 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 CTC1Q2NKJ3 1217 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 LDLRAD1Q5T700 205 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 CLHC1Q8NHS4 586 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 NUP205Q92621 2012 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 MRPS26Q9BYN8 205 aaKnown RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 NMUR1Q9HB89 426 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 RSL24D1Q9UHA3 163 aaKnown RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 KPNA4O00629 521 aaPredicted RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 SEPT4O43236 478 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 HAPLN1P10915 354 aaPredicted RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 MZF1P28698 734 aaPredicted RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 CORO1AP31146 461 aaKnown RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 KCNQ1P51787 676 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 LCP2Q13094 533 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 LDLRAP1Q5SW96 308 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 TTC23LQ6PF05 361 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 GCNT7Q6ZNI0 430 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 ANKS3Q6ZW76 656 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 DET1Q7L5Y6 550 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 C3orf58Q8NDZ4 430 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 FOPNLQ96NB1 174 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 CCSER2Q9H7U1 834 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 LIN28AQ9H9Z2 209 aaKnown RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 TIMMDC1Q9NPL8 285 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 TMLHEQ9NVH6 421 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 SPASTQ9UBP0 616 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 EIF2B4Q9UI10 523 aaKnown RBP12.2□□□□□ -0.46
COL20A1-201ENST00000358894 INVSQ9Y283 1065 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 TLR6Q9Y2C9 796 aa12.2□□□□□ -0.46
COL20A1-201ENST00000358894 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 RNASEH1O60930 286 aaKnown RBP12.19□□□□□ -0.46
COL20A1-201ENST00000358894 TYMPP19971 482 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 LSM3P62310 102 aaKnown RBP12.19□□□□□ -0.46
COL20A1-201ENST00000358894 IL5RAQ01344 420 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 IL10RBQ08334 325 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 CCNIQ14094 377 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 MAPKAPK3Q16644 382 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 UPP1Q16831 310 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 RSBN1Q5VWQ0 802 aaPredicted RBP12.19□□□□□ -0.46
COL20A1-201ENST00000358894 PRSS55Q6UWB4 352 aaPredicted RBP12.19□□□□□ -0.46
COL20A1-201ENST00000358894 STK40Q8N2I9 435 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 PARP8Q8N3A8 854 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 CPSF7Q8N684 471 aaKnown RBP12.19□□□□□ -0.46
COL20A1-201ENST00000358894 ZMIZ2Q8NF64 920 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 BRSK1Q8TDC3 778 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
COL20A1-201ENST00000358894 SORT1Q99523 831 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms