RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MEI4A8MW99 385 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 DLL1O00548 723 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 LILRB5O75023 590 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 PAMP19021 973 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 GPR1P46091 355 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 PTPN5P54829 565 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 PLK5Q496M5 336 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 ZNF648Q5T619 568 aaPredicted RBP25.22■■□□□ 1.63
SSBP3-202ENST00000357475 TRMT10CQ7L0Y3 403 aaKnown RBP25.22■■□□□ 1.63
SSBP3-202ENST00000357475 LPCAT2Q7L5N7 544 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 TRIM74Q86UV6 250 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 SERAC1Q96JX3 654 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 SLC6A18Q96N87 628 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 PPANQ9NQ55 473 aaKnown RBP25.22■■□□□ 1.63
SSBP3-202ENST00000357475 IARS2Q9NSE4 1012 aaKnown RBP25.22■■□□□ 1.63
SSBP3-202ENST00000357475 SLC30A1Q9Y6M5 507 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 CXorf49A8MYA2 514 aaPredicted RBP25.21■■□□□ 1.63
SSBP3-202ENST00000357475 NEPROQ6NW34 567 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 DENND6AQ8IWF6 608 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 NAT14Q8WUY8 206 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 TTC25Q96NG3 672 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 ZSCAN5AQ9BUG6 496 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 LGR4Q9BXB1 951 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 C1QTNF7Q9BXJ2 289 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 CDH19Q9H159 772 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 CATSPERZQ9NTU4 200 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 R4GN57 208 aa25.21■■□□□ 1.63
SSBP3-202ENST00000357475 CD3EAPO15446 510 aaKnown RBP25.2■■□□□ 1.62
SSBP3-202ENST00000357475 CD27P26842 260 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 NUBP1P53384 320 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 CACNG1Q06432 222 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 BRD3Q15059 726 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 KHDC1Q4VXA5 237 aaKnown RBP25.2■■□□□ 1.62
SSBP3-202ENST00000357475 PDPK2PQ6A1A2 396 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 LAYNQ6UX15 382 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 CEP68Q76N32 757 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 SNX20Q7Z614 316 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 NLRP8Q86W28 1048 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 HEATR4Q86WZ0 1026 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 PRSS33Q8NF86 280 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 UBLCP1Q8WVY7 318 aaPredicted RBP25.2■■□□□ 1.62
SSBP3-202ENST00000357475 MIR1-1HGQ9H1L0 117 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 RABGEF1Q9UJ41 708 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 PCDHGA2Q9Y5H1 932 aa25.2■■□□□ 1.62
SSBP3-202ENST00000357475 ATXN2Q99700 1313 aaKnown RBP25.2■■□□□ 1.62
SSBP3-202ENST00000357475 CCDC151A5D8V7 595 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 AGAP14A8MT82 685 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 GSTA2P09210 222 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 ITGALP20701 1170 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 ITPKAP23677 461 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 AKT2P31751 481 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 HSD17B3P37058 310 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 DHPSP49366 369 aaPredicted RBP25.19■■□□□ 1.62
SSBP3-202ENST00000357475 CTBP1Q13363 440 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 FRG1Q14331 258 aaKnown RBP25.19■■□□□ 1.62
SSBP3-202ENST00000357475 ZNF470Q6ECI4 717 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 TAS2R42Q7RTR8 314 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 OTUD6BQ8N6M0 293 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 DENND6BQ8NEG7 585 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 SGSM3Q96HU1 749 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 DMTF1Q9Y222 760 aa25.19■■□□□ 1.62
SSBP3-202ENST00000357475 TRBV5-4A0A0C4DH59 114 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 PRAMEF26H0Y7S4 382 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 MTX2O75431 263 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 TSHRP16473 764 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 THOC5Q13769 683 aaKnown RBP25.18■■□□□ 1.62
SSBP3-202ENST00000357475 SLC29A2Q14542 456 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 LPAL2Q16609 132 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 KBTBD12Q3ZCT8 623 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 FASTKD1Q53R41 847 aaKnown RBP25.18■■□□□ 1.62
SSBP3-202ENST00000357475 ZNF789Q5FWF6 425 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 TPRG1LQ5T0D9 272 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 TEDDM1Q5T9Z0 273 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 SERPINA9Q86WD7 417 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 C1orf216Q8TAB5 229 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 DTX3LQ8TDB6 740 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 BTN2A2Q8WVV5 523 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 FOXJ1Q92949 421 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 GLYATL1Q969I3 302 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 CRLS1Q9UJA2 301 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 PSAT1Q9Y617 370 aa25.18■■□□□ 1.62
SSBP3-202ENST00000357475 OAS3Q9Y6K5 1087 aaKnown RBP25.18■■□□□ 1.62
SSBP3-202ENST00000357475 FPGTO14772 594 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 CNR2P34972 360 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 TRIM23P36406 574 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 SLC1A2P43004 574 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 MPP1Q00013 466 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 CDK3Q00526 305 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 MGAT5Q09328 741 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 TCF15Q12870 199 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 ITGA9Q13797 1035 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 SIM2Q14190 667 aaPredicted RBP25.17■■□□□ 1.62
SSBP3-202ENST00000357475 DBN1Q16643 649 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 ADAMTSL4Q6UY14 1074 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 RGL4Q8IZJ4 473 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 DNASE2BQ8WZ79 361 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 BOCQ9BWV1 1114 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 SMOXQ9NWM0 555 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 KCTD5Q9NXV2 234 aa25.17■■□□□ 1.62
SSBP3-202ENST00000357475 TP53BP1Q12888 1972 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms