RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 AXIN1O15169 862 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ZW10O43264 779 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RPS17P08708 135 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 DBTP11182 482 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 HLA-FP30511 346 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CTSKP43235 329 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 EMP3P54852 163 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CLDN10P78369 228 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 NFE2L1Q14494 772 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ZIK1Q3SY52 487 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 SLC27A3Q5K4L6 730 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 EIF3MQ7L2H7 374 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 SH3BP5LQ7L8J4 393 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 FBXO39Q8N4B4 442 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 OR13F1Q8NGS4 319 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CSGALNACT1Q8TDX6 532 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 SHISA4Q96DD7 197 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 IDI2Q9BXS1 227 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TMCC3Q9ULS5 477 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TRAF6Q9Y4K3 522 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TOR1BO14657 336 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ARHGEF15O94989 841 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CPB1P15086 417 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 HOXD11P31277 338 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CPOXP36551 454 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RARRES1P49788 294 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 GMFBP60983 142 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 GAD2Q05329 585 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 GK5Q6ZS86 529 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 VASH1Q7L8A9 365 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TRPV3Q8NET8 790 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 OR2T12Q8NG77 320 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RHBDF1Q96CC6 855 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 FAM120BQ96EK7 910 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 MKRN2Q9H000 416 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RBM38Q9H0Z9 239 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 POMKQ9H5K3 350 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PAQR5Q9NXK6 330 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TLR6Q9Y2C9 796 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PCDHB3Q9Y5E6 796 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 C12orf71A8MTZ7 269 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PIGRP01833 764 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 DPYSL2Q16555 572 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 LSM12Q3MHD2 195 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RFTN2Q52LD8 501 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF470Q6ECI4 717 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 C1orf52Q8N6N3 182 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF781Q8N8C0 355 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CHST13Q8NET6 341 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 LPCAT1Q8NF37 534 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 LPGAT1Q92604 370 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TTC9Q92623 222 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 HDAC10Q969S8 669 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CCDC115Q96NT0 180 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CDHR5Q9HBB8 845 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ARHGEF4Q9NR80 690 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CNTN3Q9P232 1028 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PRR12Q9ULL5 1215 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RNF112Q9ULX5 631 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PCDHB8Q9UN66 801 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PRG3Q9Y2Y8 225 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 H0Y858 1186 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 INO80B-WBP1J3KQ70 363 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 GABRDO14764 452 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 NKRFO15226 690 aaKnown RBP eCLIP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 B4GALT4O60513 344 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RNASEH2AO75792 299 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PAPSS2O95340 614 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ANGPTL1O95841 491 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ADRB2P07550 413 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 HSMCR30P0CW71 290 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 MZF1P28698 734 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ARPP19P56211 112 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TEAD4Q15561 434 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ATF7IP2Q5U623 682 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 AGAP6Q5VW22 663 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 KCNT2Q6UVM3 1135 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 DNAJC14Q6Y2X3 702 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PLCZ1Q86YW0 608 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RBFAQ8N0V3 343 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 DNERQ8NFT8 737 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CLHC1Q8NHS4 586 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 LRRC15Q8TF66 581 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 KCTD4Q8WVF5 259 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 AGAP4Q96P64 663 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 DDX60LQ5H9U9 1706 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ARID2Q68CP9 1835 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 SLC15A5A6NIM6 579 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 HCN1O60741 890 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CPNE3O75131 537 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ATE1O95260 518 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 IL4RP24394 825 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 OPRL1P41146 370 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 GLRBP48167 497 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 MCCD1P59942 119 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 HSF2Q03933 536 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CCDC85BQ15834 202 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 NDUFA9Q16795 377 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 SULT1C3Q6IMI6 304 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 FAM122CQ6P4D5 195 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms