RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ZNF711Q9Y462 761 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 PCDHGA8Q9Y5G5 932 aa16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 EPN1Q9Y6I3 576 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-201ENST00000355572 A0A0A6YYK5 440 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 GPR39O43194 453 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 NUDT21O43809 227 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 TNFSF15O95150 251 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 ASMTLO95671 621 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 ZFXP17010 805 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 NFKBIAP25963 317 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 CSF2RBP32927 897 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 UGT1A5P35504 534 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 INHBCP55103 352 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 PCBP4P57723 403 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 CDK18Q07002 472 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 ILF3Q12906 894 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 SRSF6Q13247 344 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 OLIG2Q13516 323 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 NR1D2Q14995 579 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 C16orf72Q14CZ0 275 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 TFDP3Q5H9I0 405 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 NKAIN2Q5VXU1 208 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 PCSK4Q6UW60 755 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 CCDC170Q8IYT3 715 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 NDUFAF2Q8N183 169 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 EXD1Q8NHP7 514 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 WDR36Q8NI36 951 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 ALG3Q92685 438 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 MRGPRX2Q96LB1 330 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 PANX2Q96RD6 677 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 FAM83DQ9H4H8 585 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 CPNE5Q9HCH3 593 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
PDLIM7-201ENST00000355572 MTX2O75431 263 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 PNLIPP16233 465 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 ZNF8P17098 575 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 BPIP17213 487 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 CA4P22748 312 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 CCKBRP32239 447 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 ERVPABLB-1P60509 514 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 AMZ1Q400G9 498 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 USP53Q70EK8 1073 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 CLEC14AQ86T13 490 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 TTC30BQ8N4P2 665 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 WDR48Q8TAF3 677 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 SLC37A2Q8TED4 501 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 TFB1MQ8WVM0 346 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 PMEPA1Q969W9 287 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 QKIQ96PU8 341 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 ZFYVE1Q9HBF4 777 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 BPIFA1Q9NP55 256 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 PKD2L2Q9NZM6 624 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 ATXN10Q9UBB4 475 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 KCNK6Q9Y257 313 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 SSUH2Q9Y2M2 353 aa16.58■□□□□ 0.24
PDLIM7-201ENST00000355572 LOC285095A0A1B0GVY8 99 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 A6NCN8 305 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 ZRANB2O95218 330 aaKnown RBP eCLIP16.57■□□□□ 0.242e-6■■■□□ 18.6
PDLIM7-201ENST00000355572 NDST3O95803 873 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 PRB1P04280 392 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 RBL1P28749 1068 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 CD1CP29017 333 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 ALDH4A1P30038 563 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 CTNNA1P35221 906 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 CYLC1P35663 651 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 NR2C2P49116 596 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 ARSDP51689 593 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 WNT3AP56704 352 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 PTPRCAPQ14761 206 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 SLC14A2Q15849 920 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 LRRC69Q6ZNQ3 347 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 BBS12Q6ZW61 710 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 RAB11FIP2Q7L804 512 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 CHST15Q7LFX5 561 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 CCDC50Q8IVM0 306 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 LSMEM2Q8N112 164 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 LRRC57Q8N9N7 239 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 RCBTB1Q8NDN9 531 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 ZNF248Q8NDW4 579 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 KIAA1524Q8TCG1 905 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 FCRL3Q96P31 734 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 SPATA16Q9BXB7 569 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 CDH19Q9H159 772 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 MAGEE1Q9HCI5 957 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 TBC1D29Q9UFV1 150 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 SLC23A2Q9UGH3 650 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 ZNHIT2Q9UHR6 403 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 DNPEPQ9ULA0 475 aa16.57■□□□□ 0.24
PDLIM7-201ENST00000355572 PLD2O14939 933 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 RRP8O43159 456 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 BUD23O43709 281 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 ACP5P13686 325 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 MPSTP25325 297 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 CLN3Q13286 438 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 TFDP2Q14188 446 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 SPA17Q15506 151 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 TGIF1Q15583 401 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 PPP2R5EQ16537 467 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms