RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 INPP5DQ92835 1189 aa25.53■■□□□ 1.68
CLK2-201ENST00000355560 ZDHHC2Q9UIJ5 367 aa25.53■■□□□ 1.68
CLK2-201ENST00000355560 PPIL1Q9Y3C6 166 aa25.53■■□□□ 1.68
CLK2-201ENST00000355560 GLYATL1P3A0A0U1RQE8 302 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 TTC34A8MYJ7 566 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 MATN2O00339 956 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 FSHRP23945 695 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 SERPINB5P36952 375 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 OR4D1Q15615 310 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 EPGNQ6UW88 154 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 GET4Q7L5D6 327 aaPredicted RBP25.52■■□□□ 1.68
CLK2-201ENST00000355560 SERPINA9Q86WD7 417 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 SIDT2Q8NBJ9 832 aaKnown RBP25.52■■□□□ 1.68
CLK2-201ENST00000355560 MAPK15Q8TD08 544 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 FRS2Q8WU20 508 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 PTCD3Q96EY7 689 aaKnown RBP25.52■■□□□ 1.68
CLK2-201ENST00000355560 ZFYVE19Q96K21 471 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 CNDP1Q96KN2 507 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 MCCC1Q96RQ3 725 aaPredicted RBP25.52■■□□□ 1.68
CLK2-201ENST00000355560 SLC30A3Q99726 388 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 TUBB6Q9BUF5 446 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 DERL2Q9GZP9 239 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 P2RY12Q9H244 342 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 CDH22Q9UJ99 828 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 TRMT6Q9UJA5 497 aaKnown RBP25.52■■□□□ 1.68
CLK2-201ENST00000355560 COMMD10Q9Y6G5 202 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 WASH3PC4AMC7 463 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 E5RI56 91 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 HOXC11O43248 304 aaPredicted RBP25.52■■□□□ 1.68
CLK2-201ENST00000355560 HNRNPCL1O60812 293 aaKnown RBP25.52■■□□□ 1.68
CLK2-201ENST00000355560 SPAM1P38567 509 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 LRRC73Q5JTD7 316 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 GDPD4Q6W3E5 623 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 KIAA1958Q8N8K9 716 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 RHEBL1Q8TAI7 183 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 SMARCD2Q92925 531 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 NSL1Q96IY1 281 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 KLHL32Q96NJ5 620 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 TFB2MQ9H5Q4 396 aaKnown RBP25.52■■□□□ 1.68
CLK2-201ENST00000355560 IGFLR1Q9H665 355 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 LNPEPQ9UIQ6 1025 aa25.52■■□□□ 1.68
CLK2-201ENST00000355560 CAPN14A8MX76 684 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 PRMT5O14744 637 aaPredicted RBP25.51■■□□□ 1.67
CLK2-201ENST00000355560 CISD3P0C7P0 127 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 CHRM1P11229 460 aaPredicted RBP25.51■■□□□ 1.67
CLK2-201ENST00000355560 CHRM3P20309 590 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 LHCGRP22888 699 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 HK2P52789 917 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 SEL1L3Q68CR1 1132 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 GRAMD4Q6IC98 578 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 PLPP6Q8IY26 295 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 ST13P5Q8NFI4 369 aaPredicted RBP25.51■■□□□ 1.67
CLK2-201ENST00000355560 GIMAP7Q8NHV1 300 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 CD200R1Q8TD46 325 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 EBF3Q9H4W6 596 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 HDAC3O15379 428 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 SMIM24O75264 130 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 KRT16P08779 473 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 HNRNPLP14866 589 aaKnown RBP eCLIP25.51■■□□□ 1.674e-7■■□□□ 13
CLK2-201ENST00000355560 ARSAP15289 507 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 CD9P21926 228 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 CALB2P22676 271 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 CA5AP35218 305 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 PPARGP37231 505 aaPredicted RBP25.51■■□□□ 1.67
CLK2-201ENST00000355560 NFKB2Q00653 900 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 UBAP2LQ14157 1087 aaKnown RBP25.51■■□□□ 1.67
CLK2-201ENST00000355560 SLC9B1Q4ZJI4 515 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 TREML1Q86YW5 311 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 CBARPQ8N350 705 aaPredicted RBP25.51■■□□□ 1.67
CLK2-201ENST00000355560 CCDC97Q96F63 343 aaPredicted RBP25.51■■□□□ 1.67
CLK2-201ENST00000355560 BRD9Q9H8M2 597 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 MSRAQ9UJ68 235 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 SLC8A2Q9UPR5 921 aa25.51■■□□□ 1.67
CLK2-201ENST00000355560 TULP3O75386 442 aa25.5■■□□□ 1.67
CLK2-201ENST00000355560 SNUPNO95149 360 aaKnown RBP25.5■■□□□ 1.67
CLK2-201ENST00000355560 CYB5D1Q6P9G0 228 aa25.5■■□□□ 1.67
CLK2-201ENST00000355560 RPS27LQ71UM5 84 aaKnown RBP25.5■■□□□ 1.67
CLK2-201ENST00000355560 NKAPQ8N5F7 415 aaKnown RBP25.5■■□□□ 1.67
CLK2-201ENST00000355560 KIAA1191Q96A73 305 aa25.5■■□□□ 1.67
CLK2-201ENST00000355560 ATOH8Q96SQ7 321 aa25.5■■□□□ 1.67
CLK2-201ENST00000355560 TTC1Q99614 292 aa25.5■■□□□ 1.67
CLK2-201ENST00000355560 HEPHQ9BQS7 1158 aa25.5■■□□□ 1.67
CLK2-201ENST00000355560 CCDC106Q9BWC9 280 aa25.5■■□□□ 1.67
CLK2-201ENST00000355560 PCDHB1Q9Y5F3 818 aa25.5■■□□□ 1.67
CLK2-201ENST00000355560 A0A1W2PQ67 120 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 IQCF5A8MTL0 148 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 TPBGLP0DKB5 382 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 ZNF7P17097 686 aaPredicted RBP25.49■■□□□ 1.67
CLK2-201ENST00000355560 ATP6V0D1P61421 351 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 CHRNA6Q15825 494 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 GPR26Q8NDV2 337 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 BOCQ9BWV1 1114 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 CLPBQ9H078 707 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 SLC28A3Q9HAS3 691 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 SARS2Q9NP81 518 aaKnown RBP25.49■■□□□ 1.67
CLK2-201ENST00000355560 DZANK1Q9NVP4 752 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 CRLS1Q9UJA2 301 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 SORCS3Q9UPU3 1222 aa25.49■■□□□ 1.67
CLK2-201ENST00000355560 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.49■■□□□ 1.67
CLK2-201ENST00000355560 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms