RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 NSUN3Q9H649 340 aaKnown RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 VAPAQ9P0L0 249 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 COPG2Q9UBF2 871 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 SH2B3Q9UQQ2 575 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 F8P00451 2351 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 LYSTQ99698 3801 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 NCF1BA6NI72 391 aaPredicted RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 NCF1CA8MVU1 366 aaPredicted RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 TM4SF5O14894 197 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 MAFGO15525 162 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 PIGNO95427 931 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 HLA-DQB2P05538 268 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 NCF1P14598 390 aaPredicted RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 SPNP16150 400 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 PFKLP17858 780 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 STXBP2Q15833 593 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 MGAT5BQ3V5L5 792 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 OR6B2Q6IFH4 312 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 PSAPL1Q6NUJ1 521 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 ISCA2Q86U28 154 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 ANKRD46Q86W74 232 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 GBP7Q8N8V2 638 aaPredicted RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 MAGEB18Q96M61 343 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 GBP5Q96PP8 586 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 PLSCR3Q9NRY6 295 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 VWA7Q9Y334 891 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 UBXN8O00124 270 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 PRPF4O43172 522 aaKnown RBP eCLIP5.61□□□□□ -1.51
CD47-201ENST00000355354 TCEA3O75764 348 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 SEC24DO94855 1032 aaPredicted RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 APOL3O95236 402 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 TBX6O95947 436 aaPredicted RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 GSNP06396 782 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 HMBSP08397 361 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 SLC1A2P43004 574 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 SCNN1GP51170 649 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 BMXP51813 675 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 HMGCS1Q01581 520 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 KLF10Q13118 480 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 POM121L1PQ3SYA9 428 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 PIK3R6Q5UE93 754 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 NADSYN1Q6IA69 706 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 ZC3HC1Q86WB0 502 aaKnown RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 NPAS4Q8IUM7 802 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 AMER3Q8N944 861 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 ATP11CQ8NB49 1132 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 COLGALT1Q8NBJ5 622 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 TTC13Q8NBP0 860 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 DNAJC9Q8WXX5 260 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 PSMG2Q969U7 264 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 ZNF287Q9HBT7 754 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 AVENQ9NQS1 362 aaPredicted RBP5.61□□□□□ -1.51
CD47-201ENST00000355354 BATF3Q9NR55 127 aa5.61□□□□□ -1.51
CD47-201ENST00000355354 A0A1B0GVC2 190 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 A6NIN4 97 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 GAPDHSO14556 408 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 SLC16A3O15427 465 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 ALDH1A2O94788 518 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 PRKCBP05771 671 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 ITGAVP06756 1048 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 GLULP15104 373 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CLCN4P51793 760 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 WNT3AP56704 352 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 GALNT2Q10471 571 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 GPS2Q13227 327 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 BFSP2Q13515 415 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SPDYE7PQ495Y7 208 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 BTBD8Q5XKL5 378 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 RNF43Q68DV7 783 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 RBM44Q6ZP01 1051 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 PDSS2Q86YH6 399 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SLFN12Q8IYM2 578 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 DSELQ8IZU8 1212 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SLC39A11Q8N1S5 342 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 DYDC1Q8WWB3 177 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 EBNA1BP2Q99848 306 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 BTBD10Q9BSF8 475 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 KATNAL1Q9BW62 490 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SPATA16Q9BXB7 569 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SEPT10Q9P0V9 454 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 EPS15L1Q9UBC2 864 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 FLNAP21333 2647 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 WASH3PC4AMC7 463 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 MEN1O00255 615 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 MATN2O00339 956 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 XPO1O14980 1071 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 ZSCAN9O15535 394 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 EXTL3O43909 919 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SNAP91O60641 907 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 ZNF623O75123 536 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 MOCS2O96007 188 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 TPM1P09493 284 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 ENO3P13929 434 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 PMLP29590 882 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SLC6A4P31645 630 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 DHX34Q14147 1143 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 TCEAL1Q15170 157 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 PHKG1Q16816 387 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 ZNF699Q32M78 642 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 INAVAQ3KP66 663 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms