RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TIMM22Q9Y584 194 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 C5orf60A6NFR6 353 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 GPR25O00155 361 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 SEPT4O43236 478 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 TNFRSF21O75509 655 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 RHOQP17081 205 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 IDSP22304 550 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 OR7D4Q8NG98 312 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 ADAMTS15Q8TE58 950 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 AP2M1Q96CW1 435 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 SEMA3GQ9NS98 782 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 CRNNQ9UBG3 495 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-202ENST00000355133 PCDHA2Q9Y5H9 948 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 PRR5-ARHGAP8B1AHC4 643 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 OR5F1O95221 314 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 RPL17P18621 184 aaKnown RBP13.16□□□□□ -0.3
SCN8A-202ENST00000355133 PTPN5P54829 565 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 CACNG1Q06432 222 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 ATAT1Q5SQI0 421 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 TTC27Q6P3X3 843 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 PACS2Q86VP3 889 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 LMLNQ96KR4 655 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 TCF12Q99081 682 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCN8A-202ENST00000355133 BTBD3Q9Y2F9 522 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 PCDHB1Q9Y5F3 818 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 C2orf71A6NGG8 1288 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 WWP2O00308 870 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-202ENST00000355133 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
SCN8A-202ENST00000355133 AKT2P31751 481 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 MPP1Q00013 466 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 ELP6Q0PNE2 266 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 NAE1Q13564 534 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 PLD5Q8N7P1 536 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 LRTM1Q9HBL6 345 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 TMEM138Q9NPI0 162 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 PCDHGC4Q9Y5F7 938 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 SNAP91O60641 907 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 UGT2B17O75795 530 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 NDST3O95803 873 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 MYL9P24844 172 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 ARL2P36404 184 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 MBTD1Q05BQ5 628 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 MED22Q15528 200 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 ARL14EPQ8N8R7 260 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-202ENST00000355133 SPATA22Q8NHS9 363 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 HMCESQ96FZ2 354 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 PCED1BQ96HM7 432 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 EXD2Q9NVH0 621 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF446Q9NWS9 450 aa13.16□□□□□ -0.3
SCN8A-202ENST00000355133 GLTPD2A6NH11 291 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PPM1JQ5JR12 505 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 CFAP206Q8IYR0 622 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 DCBLD1Q8N8Z6 715 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 OR2T12Q8NG77 320 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PIH1D2Q8WWB5 315 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 TBATAQ96M53 351 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 GBA3Q9H227 469 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 G3V2T6 193 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 DUSP11O75319 330 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 SEC24AO95486 1093 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 CHRNGP07510 517 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 OMPP47874 163 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 LGALS3BPQ08380 585 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 AKIRIN2Q53H80 203 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 MTX3Q5HYI7 312 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 B3GNT6Q6ZMB0 384 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 MON1BQ7L1V2 547 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 RALGPS2Q86X27 583 aaPredicted RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 GALNT13Q8IUC8 556 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 NEK7Q8TDX7 302 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 NIFKQ9BYG3 293 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 RBM7Q9Y580 266 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 CD48P09326 243 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PPIBP23284 216 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 HNRNPH3P31942 346 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 IGFALSP35858 605 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 ERVK-21P61565 698 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 IKBIPQ70UQ0 350 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 FBXO22Q8NEZ5 403 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 XAGE5Q8WWM1 108 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 OMA1Q96E52 524 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 MAML3Q96JK9 1138 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 TCF25Q9BQ70 676 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 CDADC1Q9BWV3 514 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 ABCB10Q9NRK6 738 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PSMD13Q9UNM6 376 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 REXO2Q9Y3B8 237 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 LRCH4O75427 683 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 IPO13O94829 963 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PRAMEF1O95521 474 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 TPSB2P20231 275 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 NT5EP21589 574 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms