RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SPATC1Q76KD6 591 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 CENPLQ8N0S6 344 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 CADM2Q8N3J6 435 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 ATPAF2Q8N5M1 289 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 MYLPFQ96A32 169 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 EFHD2Q96C19 240 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 PHF21BQ96EK2 531 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 FSD1LQ9BXM9 530 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TRIM8Q9BZR9 551 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 NANOGQ9H9S0 305 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 ANKMY1Q9P2S6 941 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 RAP2CQ9Y3L5 183 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 ZSWIM8A7E2V4 1837 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 BPTFQ12830 3046 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 C9JVG2 144 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 JRKO75564 520 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SCO1O75880 301 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 PGK1P00558 417 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 THP07101 528 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SLC12A2P55011 1212 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TAS2R39P59534 338 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 MAXP61244 160 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SEMA3BQ13214 749 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 DGCR6Q14129 220 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 GRB14Q14449 540 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 USP41Q3LFD5 358 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 CYP20A1Q6UW02 462 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 CLEC14AQ86T13 490 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TNIP2Q8NFZ5 429 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TRPC4APQ8TEL6 797 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 CANT1Q8WVQ1 401 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 KCTD13Q8WZ19 329 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 HDAC11Q96DB2 347 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SH3YL1Q96HL8 342 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 ZNF597Q96LX8 424 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 MROQ9BYG7 248 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 RHOJQ9H4E5 214 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 MAGEE1Q9HCI5 957 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 FLRT1Q9NZU1 646 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 MTRRQ9UBK8 725 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 CDYLQ9Y232 598 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 MANSC4A6NHS7 340 aaPredicted RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 F8W810 466 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 GRID2O43424 1007 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 SYNCRIPO60506 623 aaKnown RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 ABCB1P08183 1280 aaPredicted RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 STMN1P16949 149 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 NPY2RP49146 381 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 PGFP49763 221 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 HNRNPFP52597 415 aaKnown RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 VAC14Q08AM6 782 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 GALNT2Q10471 571 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 TIGD5Q53EQ6 642 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 ZNF789Q5FWF6 425 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 PIGGQ5H8A4 983 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 SDHAF4Q5VUM1 108 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 ZCCHC8Q6NZY4 707 aaKnown RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 TFAP2DQ7Z6R9 452 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 MFSD6LQ8IWD5 586 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 NRBF2Q96F24 287 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 ZNF717Q9BY31 904 aaPredicted RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 RBM22Q9NW64 420 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMG6-202ENST00000354901 ANGPTL3Q9Y5C1 460 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 LOC105371267A0A1B0GV96 52 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 ATP6AP2A0A1C7CYW4 349 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 MBLAC1A4D2B0 266 aaPredicted RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 RGSL1A5PLK6 1076 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 HOXC11O43248 304 aaPredicted RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 ATP6AP2O75787 350 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 POLR2EP19388 210 aaKnown RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 GLDCP23378 1020 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 WEE1P30291 646 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 AXLP30530 894 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 SLC1A2P43004 574 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 MAGEA12P43365 314 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 ZNF135P52742 658 aaPredicted RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 PRKCQQ04759 706 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 SLC12A1Q13621 1099 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 RBM20Q5T481 1227 aaKnown RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 CNSTQ6PJW8 725 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 ZYG11AQ6WRX3 759 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 SCN4BQ8IWT1 228 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 NTAN1Q96AB6 310 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 GPR22Q99680 433 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 TBL1YQ9BQ87 522 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 TTYH2Q9BSA4 534 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 POMKQ9H5K3 350 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 PIF1Q9H611 641 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 TMLHEQ9NVH6 421 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 CCDC167Q9P0B6 97 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 TRHDEQ9UKU6 1024 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 PRPF19Q9UMS4 504 aaKnown RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 ST3GAL5Q9UNP4 418 aa9.34□□□□□ -0.91
SMG6-202ENST00000354901 MTF2Q9Y483 593 aaPredicted RBP9.34□□□□□ -0.91
SMG6-202ENST00000354901 C17orf102A2RUQ5 167 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 TTC34A8MYJ7 566 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 EI24O14681 340 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms