RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 MT-CO1P00395 513 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 TFPTP0C1Z6 253 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ADCYAP1R1P41586 468 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 BTG3Q14201 252 aaPredicted RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 NEDD8Q15843 81 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 XAF1Q6GPH4 301 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ZC3H7AQ8IWR0 971 aaKnown RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 SLC15A4Q8N697 577 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 POP5Q969H6 163 aaKnown RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 TADA1Q96BN2 335 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF599Q96NL3 588 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ATOH8Q96SQ7 321 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 LRRC3Q9BY71 257 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 RAD21L1Q9H4I0 556 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 FANCEQ9HB96 536 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 SYTL2Q9HCH5 934 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 RNF19AQ9NV58 838 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 SHROOM3Q8TF72 1996 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 DICER1Q9UPY3 1922 aaKnown RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 FAM234BA2RU67 622 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 CCDC154A6NI56 674 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 TMX2-CTNND1H3BSU7 103 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 PTGESO14684 152 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 KERAO60938 352 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 PAGE1O75459 146 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 SLC22A3O75751 556 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 CLIC3O95833 236 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 PEX11BO96011 259 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 MTHFD2P13995 350 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF182P17025 639 aaPredicted RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 HOXB6P17509 224 aaKnown RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 OGNP20774 298 aaKnown RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 CCR1P32246 355 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ZFP36L2P47974 494 aaKnown RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ARSFP54793 590 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 CDH13P55290 713 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 TMEM62Q0P6H9 643 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 HID1Q8IV36 788 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 STAG3L4Q8TBR4 150 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 KIAA1191Q96A73 305 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ISG20Q96AZ6 181 aaKnown RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 BTN2A3PQ96KV6 586 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 C1orf74Q96LT6 269 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 NSMCE2Q96MF7 247 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 MTG1Q9BT17 334 aaPredicted RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ELP3Q9H9T3 547 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 INIPQ9NRY2 104 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ABCC13Q9NSE7 274 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ATAD3AQ9NVI7 634 aa11.36□□□□□ -0.59
CAPN9-202ENST00000354537 ASPDHA6ND91 283 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 STX16O14662 325 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 FOXD2O60548 495 aaPredicted RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 CHEK2O96017 543 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 RAP2AP10114 183 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 THRBP10828 461 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 SLC2A3P11169 496 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 MTHFD1P11586 935 aaKnown RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 TSPAN8P19075 237 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 CRHBPP24387 322 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 POLR2IP36954 125 aaKnown RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 RPS3AP61247 264 aaKnown RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 CLCQ05315 142 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 XKR7Q5GH72 579 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 EGFLAMQ63HQ2 1017 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ANKS6Q68DC2 871 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 MRNIPQ6NTE8 343 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 TXNDC11Q6PKC3 985 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 UMODL1-AS1Q8N2C9 162 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ARRDC4Q8NCT1 418 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 MUS81Q96NY9 551 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 TMEM209Q96SK2 561 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 FEM1AQ9BSK4 669 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 MROQ9BYG7 248 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 WDR12Q9GZL7 423 aaKnown RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ING2Q9H160 280 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 SMOC2Q9H3U7 446 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 NTN4Q9HB63 628 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 SPON1Q9HCB6 807 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 TMEM30AQ9NV96 361 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 USE1Q9NZ43 259 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 MYLKQ15746 1914 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 OTOFQ9HC10 1997 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 LOC285095A0A1B0GVY8 99 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ARNTLO00327 626 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 GLP2RO95838 553 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ALPLP05186 524 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 UGT2B4P06133 528 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 RPS17P08708 135 aaKnown RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 UROSP10746 265 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF37AP17032 561 aaPredicted RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 HRH2P25021 359 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ETFBP38117 255 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 POLR2JP52435 117 aaKnown RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 CRYBB1P53674 252 aaPredicted RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 FOXA1P55317 472 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 OXCT1P55809 520 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 OXA1LQ15070 435 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms