RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 LPCAT1Q8NF37 534 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 PACSIN1Q9BY11 444 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 BRD8Q9H0E9 1235 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 CLMPQ9H6B4 373 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 PCDH9Q9HC56 1237 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 VPS18Q9P253 973 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 TBC1D29Q9UFV1 150 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 CAPN11Q9UMQ6 739 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 ADGRG1Q9Y653 693 aa15.73■□□□□ 0.11
PDGFA-201ENST00000354513 BZW2Q9Y6E2 419 aaKnown RBP15.73■□□□□ 0.11
PDGFA-201ENST00000354513 B4E171 279 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 PROSCO94903 275 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 TSPAN7P41732 249 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 SPINT3P49223 89 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 GPLD1P80108 840 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 ZBED6P86452 979 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 ZBTB17Q13105 803 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 LRP8Q14114 963 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 TMEM164Q5U3C3 297 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 TIGD7Q6NT04 549 aaPredicted RBP15.72■□□□□ 0.11
PDGFA-201ENST00000354513 ALKBH5Q6P6C2 394 aaKnown RBP15.72■□□□□ 0.11
PDGFA-201ENST00000354513 CNTD1Q8N815 330 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 EXD1Q8NHP7 514 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 HDAC11Q96DB2 347 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 DTLQ9NZJ0 730 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 AKAP7Q9P0M2 348 aaPredicted RBP15.72■□□□□ 0.11
PDGFA-201ENST00000354513 AMACRQ9UHK6 382 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 KCNK6Q9Y257 313 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 TTLL3Q9Y4R7 772 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 PCDHB11Q9Y5F2 797 aa15.72■□□□□ 0.11
PDGFA-201ENST00000354513 EFCAB7A8K855 629 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 MYO1FO00160 1098 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 SUV39H1O43463 412 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 PYGLP06737 847 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 SSR1P43307 286 aaKnown RBP15.71■□□□□ 0.11
PDGFA-201ENST00000354513 EPHB1P54762 984 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 CCDC122Q5T0U0 273 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 CHST15Q7LFX5 561 aaPredicted RBP15.71■□□□□ 0.11
PDGFA-201ENST00000354513 ARHGAP22Q7Z5H3 698 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 RAVER1Q8IY67 606 aaKnown RBP15.71■□□□□ 0.11
PDGFA-201ENST00000354513 CPLX3Q8WVH0 158 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 TRIB3Q96RU7 358 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 DPYSL5Q9BPU6 564 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 ARHGAP9Q9BRR9 750 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 RBSNQ9H1K0 784 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 APMAPQ9HDC9 416 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 SLC39A1Q9NY26 324 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 PILRAQ9UKJ1 303 aa15.71■□□□□ 0.11
PDGFA-201ENST00000354513 C1orf232A0A0U1RR37 186 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 RAD1O60671 282 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 ASMTLO95671 621 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 ACP5P13686 325 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 CSTF2P33240 577 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDGFA-201ENST00000354513 CD86P42081 329 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 RPL26P61254 145 aaKnown RBP15.7■□□□□ 0.1
PDGFA-201ENST00000354513 HHEXQ03014 270 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 BIRC2Q13490 618 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 PEX6Q13608 980 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 GALNT3Q14435 633 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 HADHQ16836 314 aaKnown RBP15.7■□□□□ 0.1
PDGFA-201ENST00000354513 ZNF648Q5T619 568 aaPredicted RBP15.7■□□□□ 0.1
PDGFA-201ENST00000354513 IYDQ6PHW0 289 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 LYSMD3Q7Z3D4 306 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 TIPARPQ7Z3E1 657 aaKnown RBP15.7■□□□□ 0.1
PDGFA-201ENST00000354513 NDUFAF2Q8N183 169 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 PLD5Q8N7P1 536 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 RAPGEF5Q92565 580 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 RTP4Q96DX8 246 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 SLC38A3Q99624 504 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 FAM117AQ9C073 453 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 ARFGAP3Q9NP61 516 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 SARS2Q9NP81 518 aaKnown RBP15.7■□□□□ 0.1
PDGFA-201ENST00000354513 ZNHIT2Q9UHR6 403 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 DNPEPQ9ULA0 475 aa15.7■□□□□ 0.1
PDGFA-201ENST00000354513 RPL26L1Q9UNX3 145 aaKnown RBP15.7■□□□□ 0.1
PDGFA-201ENST00000354513 PRR19A6NJB7 356 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 C3orf70A6NLC5 250 aaPredicted RBP15.69■□□□□ 0.1
PDGFA-201ENST00000354513 A8MU76 341 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 KCNK1O00180 336 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 ZW10O43264 779 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 DUX1O43812 170 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 CES1P23141 567 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 ATP1A2P50993 1020 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 IFI35P80217 286 aaPredicted RBP15.69■□□□□ 0.1
PDGFA-201ENST00000354513 MC2RQ01718 297 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 KCNC4Q03721 635 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 PPIDQ08752 370 aaKnown RBP15.69■□□□□ 0.1
PDGFA-201ENST00000354513 NFATC2Q13469 925 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 PDK2Q15119 407 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 ASTE1Q2TB18 679 aaPredicted RBP15.69■□□□□ 0.1
PDGFA-201ENST00000354513 WDR74Q6RFH5 385 aaPredicted RBP15.69■□□□□ 0.1
PDGFA-201ENST00000354513 FAM129CQ86XR2 697 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 CCDC13Q8IYE1 715 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 CACNA2D3Q8IZS8 1091 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 ZSCAN1Q8NBB4 408 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 KCTD6Q8NC69 237 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 CTRCQ99895 268 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 TBC1D10AQ9BXI6 508 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 CEP41Q9BYV8 373 aa15.69■□□□□ 0.1
PDGFA-201ENST00000354513 GEMIN8Q9NWZ8 242 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms