RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 NPLQ9BXD5 320 aaPredicted RBP24.41■■□□□ 1.5
CPNE1-202ENST00000352393 ALG2Q9H553 416 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 AIG1Q9NVV5 245 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 ZNHIT2Q9UHR6 403 aa24.41■■□□□ 1.5
CPNE1-202ENST00000352393 MYADML2A6NDP7 307 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 EI24O14681 340 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 RPS17P08708 135 aaKnown RBP24.4■■□□□ 1.5
CPNE1-202ENST00000352393 OR4Q2P0C623 313 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 ETFBP38117 255 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 NFYCQ13952 458 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 CYP51A1Q16850 503 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 RABL3Q5HYI8 236 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 MON1AQ86VX9 555 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 UPF1Q92900 1129 aaKnown RBP eCLIP24.4■■□□□ 1.5
CPNE1-202ENST00000352393 IGSF8Q969P0 613 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 SEMA3CQ99985 751 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 OSBPL6Q9BZF3 934 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 IKZF3Q9UKT9 509 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 SUPT3HB4E1H0 165 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 GPR182O15218 404 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 INPP4BO15327 924 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 SUPT3HO75486 399 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 VARSP26640 1264 aaKnown RBP24.4■■□□□ 1.5
CPNE1-202ENST00000352393 GDF6Q6KF10 455 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-202ENST00000352393 FBXO39Q8N4B4 442 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 CYGBQ8WWM9 190 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 DERL2Q9GZP9 239 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 RIMKLBQ9ULI2 386 aa24.4■■□□□ 1.5
CPNE1-202ENST00000352393 EEDO75530 441 aaKnown RBP24.39■■□□□ 1.49
CPNE1-202ENST00000352393 CYBBP04839 570 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 CAPGP40121 348 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 STT3AP46977 705 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 CACNB2Q08289 660 aaPredicted RBP24.39■■□□□ 1.49
CPNE1-202ENST00000352393 GRIK2Q13002 908 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 OR4L1Q8NH43 312 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 FNDC8Q8TC99 324 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 TEX37Q96LM6 180 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 UROC1Q96N76 676 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 SEMA4BQ9NPR2 832 aaPredicted RBP24.39■■□□□ 1.49
CPNE1-202ENST00000352393 CDC14AQ9UNH5 594 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 CLEC11AQ9Y240 323 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 MED16Q9Y2X0 877 aa24.39■■□□□ 1.49
CPNE1-202ENST00000352393 DYTNA2CJ06 578 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 MUSKO15146 869 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 CLOCKO15516 846 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 KCNK10P57789 538 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 LIPEQ05469 1076 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 SLC39A12Q504Y0 691 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 SETMARQ53H47 684 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 XKR7Q5GH72 579 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 FBXL22Q6P050 247 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 LYSMD3Q7Z3D4 306 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 CROCCP3Q8IVE0 287 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 STAG3L4Q8TBR4 150 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 VPS33AQ96AX1 596 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 KCTD14Q9BQ13 255 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 NUSAP1Q9BXS6 441 aaKnown RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 SEZ6LQ9BYH1 1024 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 POLR1EQ9GZS1 481 aaKnown RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 HIPK3Q9H422 1215 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 SMPD3Q9NY59 655 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 CPA4Q9UI42 421 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 RNF112Q9ULX5 631 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 FADS3Q9Y5Q0 445 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 ECI2O75521 394 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 SEC24DO94855 1032 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 CLIC3O95833 236 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 PBX3P40426 434 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 EEFSECP57772 596 aaKnown RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 ECT2LQ008S8 904 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 YWHAHQ04917 246 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 SERINC3Q13530 473 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 BTG3Q14201 252 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 GALNT3Q14435 633 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 CYBRD1Q53TN4 286 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 PAGE3Q5JUK9 113 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 SDHAF4Q5VUM1 108 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 ABRAXAS1Q6UWZ7 409 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 PATL1Q86TB9 770 aaKnown RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 COLGALT2Q8IYK4 626 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 BBS5Q8N3I7 341 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 DNAJB14Q8TBM8 379 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 BRSK1Q8TDC3 778 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 DOK1Q99704 481 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 BRINP2Q9C0B6 783 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 PLGRKTQ9HBL7 147 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 INTS10Q9NVR2 710 aaKnown RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 DNAAF2Q9NVR5 837 aaKnown RBP24.38■■□□□ 1.49
CPNE1-202ENST00000352393 RHBDL2Q9NX52 303 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 ZNF639Q9UID6 485 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 ANAPC2Q9UJX6 822 aa24.38■■□□□ 1.49
CPNE1-202ENST00000352393 RAMP2O60895 175 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 EPOP01588 193 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 POLD3Q15054 466 aaPredicted RBP24.37■■□□□ 1.49
CPNE1-202ENST00000352393 PARP15Q460N3 678 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 ANKS6Q68DC2 871 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 KIAA2013Q8IYS2 634 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 TBC1D21Q8IYX1 336 aa24.37■■□□□ 1.49
CPNE1-202ENST00000352393 ZNF420Q8TAQ5 688 aaPredicted RBP24.37■■□□□ 1.49
CPNE1-202ENST00000352393 ZNF599Q96NL3 588 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms