RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 FRMD8Q9BZ67 464 aaPredicted RBP13.84□□□□□ -0.19
SEC13-202ENST00000350697 ZNF106Q9H2Y7 1883 aaKnown RBP13.84□□□□□ -0.19
SEC13-202ENST00000350697 FGF22Q9HCT0 170 aa13.84□□□□□ -0.19
SEC13-202ENST00000350697 FKBPLQ9UIM3 349 aa13.84□□□□□ -0.19
SEC13-202ENST00000350697 TCAF1Q9Y4C2 921 aa13.84□□□□□ -0.19
SEC13-202ENST00000350697 PCDHGB2Q9Y5G2 931 aa13.84□□□□□ -0.19
SEC13-202ENST00000350697 UQCRHLA0A096LP55 91 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 GOLGA8MH3BSY2 632 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 H7C0S8 307 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 SMAPO00193 183 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 GAPDHSO14556 408 aaPredicted RBP13.83□□□□□ -0.2
SEC13-202ENST00000350697 NDC80O14777 642 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 PCDHGA12O60330 932 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 SLC25A14O95258 325 aaPredicted RBP13.83□□□□□ -0.2
SEC13-202ENST00000350697 RASGRP1O95267 797 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 PRAMEF1O95521 474 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 UQCRHP07919 91 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 JUNDP17535 347 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 MGAT1P26572 445 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 HK3P52790 923 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 SRP54P61011 504 aaKnown RBP13.83□□□□□ -0.2
SEC13-202ENST00000350697 MRPS25P82663 173 aaKnown RBP13.83□□□□□ -0.2
SEC13-202ENST00000350697 TMPRSS15P98073 1019 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 XIAPP98170 497 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 MORF4L2Q15014 288 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 SUZ12Q15022 739 aaKnown RBP13.83□□□□□ -0.2
SEC13-202ENST00000350697 SHBQ15464 509 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 CHRNA6Q15825 494 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 ALG11Q2TAA5 492 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 TSTD2Q5T7W7 516 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 ARMC3Q5W041 872 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 TRIM74Q86UV6 250 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 PHYKPLQ8IUZ5 450 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 HID1Q8IV36 788 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 PHACTR4Q8IZ21 702 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 ZNF398Q8TD17 642 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 PTCD2Q8WV60 388 aaKnown RBP13.83□□□□□ -0.2
SEC13-202ENST00000350697 BTN2A2Q8WVV5 523 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 TSACCQ96A04 125 aaPredicted RBP13.83□□□□□ -0.2
SEC13-202ENST00000350697 ERP44Q9BS26 406 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 TRIM31Q9BZY9 425 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 KLF15Q9UIH9 416 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
SEC13-202ENST00000350697 SLC17A4Q9Y2C5 497 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 DGKBQ9Y6T7 804 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 LRP4O75096 1905 aa13.83□□□□□ -0.2
SEC13-202ENST00000350697 PRSS38A1L453 326 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CCDC78A2IDD5 438 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CTAGE15A4D2H0 777 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 DYNC1I1O14576 645 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 AVILO75366 819 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 SRP72O76094 671 aaKnown RBP13.82□□□□□ -0.2
SEC13-202ENST00000350697 SEC31AO94979 1220 aaKnown RBP13.82□□□□□ -0.2
SEC13-202ENST00000350697 ASMTLO95671 621 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CEACAM5P06731 702 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CTAGE8P0CG41 777 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 MAGEA3P43357 314 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CRADDP78560 199 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 IL9RQ01113 521 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 PEX6Q13608 980 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 DOK6Q6PKX4 331 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 RD3Q7Z3Z2 195 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CTAGE6Q86UF2 777 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CTAGE4Q8IX94 777 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CEP112Q8N8E3 955 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 BBOF1Q8ND07 529 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 SAP25Q8TEE9 199 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 OR1E3Q8WZA6 343 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 PDXPQ96GD0 296 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 CDKN2AIPNLQ96HQ2 116 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 TBATAQ96M53 351 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 KIFC1Q9BW19 673 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 ASB8Q9H765 288 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 MRM3Q9HC36 420 aaKnown RBP13.82□□□□□ -0.2
SEC13-202ENST00000350697 CHRAC1Q9NRG0 131 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 SMOXQ9NWM0 555 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 SYBUQ9NX95 663 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 VPS18Q9P253 973 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 APOBEC3BQ9UH17 382 aaKnown RBP13.82□□□□□ -0.2
SEC13-202ENST00000350697 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 TMPRSS11EQ9UL52 423 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 UTP11Q9Y3A2 253 aaKnown RBP13.82□□□□□ -0.2
SEC13-202ENST00000350697 OAS3Q9Y6K5 1087 aaKnown RBP13.82□□□□□ -0.2
SEC13-202ENST00000350697 CFAP54Q96N23 3096 aa13.82□□□□□ -0.2
SEC13-202ENST00000350697 SDR42E2A6NKP2 422 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 CCL22O00626 93 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 UGT1A9O60656 530 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 SDC3O75056 442 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 PIAS2O75928 621 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 TNFP01375 233 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 IVLP07476 585 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 CD59P13987 128 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 UGT1A6P19224 532 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 ITGALP20701 1170 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 SDHBP21912 280 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 UGT1A1P22309 533 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 UGT1A4P22310 534 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 MC4RP32245 332 aa13.81□□□□□ -0.2
SEC13-202ENST00000350697 UGT1A3P35503 534 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms