RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZRANB3Q5FWF4 1079 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SH2D4BQ5SQS7 431 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 WASHC2DQ5SRD0 308 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 LY6G5CQ5SRR4 150 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ZNF678Q5SXM1 525 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SEL1L3Q68CR1 1132 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ELMSAN1Q6PJG2 1045 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PAQR3Q6TCH7 311 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 FRMD7Q6ZUT3 714 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 GRASPQ7Z6J2 395 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 LONP2Q86WA8 852 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 KIRREL3Q8IZU9 778 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 NKAPQ8N5F7 415 aaKnown RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 CCNYL1Q8N7R7 359 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 OR6K2Q8NGY2 324 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 GIMAP7Q8NHV1 300 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 CD200R1Q8TD46 325 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 FRS2Q8WU20 508 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 KCNJ9Q92806 393 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SCRN2Q96FV2 425 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PDLIM5Q96HC4 596 aaKnown RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 FAR2Q96K12 515 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 MRGPRX3Q96LB0 322 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 LRRC3BQ96PB8 259 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 OR52B2Q96RD2 323 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 GPR21Q99679 349 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SLC30A3Q99726 388 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 BBS2Q9BXC9 721 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 C1QTNF3Q9BXJ4 246 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ERVK-6Q9BXR3 956 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 GPR63Q9BZJ6 419 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 C1orf21Q9H246 121 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 TNKS2Q9H2K2 1166 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 MMADHCQ9H3L0 296 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SUV39H2Q9H5I1 410 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ALG9Q9H6U8 611 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ZFYVE1Q9HBF4 777 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 BPIFA1Q9NP55 256 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 IL26Q9NPH9 171 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 TCF7L2Q9NQB0 619 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ACSS2Q9NR19 701 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 GALPQ9UBC7 116 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 DPP7Q9UHL4 492 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 IKZF3Q9UKT9 509 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PLA2G4CQ9UP65 541 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PKP3Q9Y446 797 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PCDHB1Q9Y5F3 818 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 HCFC2Q9Y5Z7 792 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 KIAA0100Q14667 2235 aaKnown RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 UBA6A0AVT1 1052 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 NPIPB15A6NHN6 443 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 A8MUI8 341 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 GRXCR1A8MXD5 290 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 B2RBV5 119 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 NEDD8-MDP1E9PL57 170 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 STX16-NPEPL1H3BU86 382 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 SDHDO14521 159 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 UBFD1O14562 309 aaKnown RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 STX16O14662 325 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 PRMT5O14744 637 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 GYG2O15488 501 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 HOXC11O43248 304 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 SMIM24O75264 130 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 NIPSNAP2O75323 286 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 VPS26AO75436 327 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 CLDN7O95471 211 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 ENO1P06733 434 aaKnown RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 FGF4P08620 206 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 RPS17P08708 135 aaKnown RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 BPIP17213 487 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 CPOXP36551 454 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 CLCN7P51798 805 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 CCNHP51946 323 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 RAP1GDS1P52306 607 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 NAA20P61599 178 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 ECT2LQ008S8 904 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 RAD51Q06609 339 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 KLF10Q13118 480 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 GPM6BQ13491 265 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 KCNC3Q14003 757 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 HERC3Q15034 1050 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 DHCR24Q15392 516 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 SNCBQ16143 134 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 DUSP6Q16828 381 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 LSM12Q3MHD2 195 aaKnown RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 UGT3A2Q3SY77 523 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 GPR33Q49SQ1 333 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 TJAP1Q5JTD0 557 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 CFAP157Q5JU67 520 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 C9orf50Q5SZB4 431 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 LYPLAL1Q5VWZ2 237 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 TMEM215Q68D42 235 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 GRAMD4Q6IC98 578 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 FAM109BQ6ICB4 259 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-203ENST00000350034 CRTC1Q6UUV9 634 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 CYHR1Q6ZMK1 362 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 MACC1Q6ZN28 852 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 DPY19L3Q6ZPD9 716 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 TPRG1Q6ZUI0 275 aa6.87□□□□□ -1.31
TRIM55-203ENST00000350034 SNX20Q7Z614 316 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms