RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ASAH2Q9NR71 780 aa16.6■□□□□ 0.25
SAMM50-201ENST00000350028 SUPT3HB4E1H0 165 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 UBDO15205 165 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 SMAD6O43541 496 aaKnown RBP16.59■□□□□ 0.25
SAMM50-201ENST00000350028 SUPT3HO75486 399 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 IGSF6O95976 241 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 CTPS1P17812 591 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 NUDT2P50583 147 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 MTTPP55157 894 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 PTPRRQ15256 657 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 MAPRE2Q15555 327 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 PLEKHG6Q3KR16 790 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 CMPK2Q5EBM0 449 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 CTSL3PQ5NE16 218 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 PPM1LQ5SGD2 360 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 TXNDC11Q6PKC3 985 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 TPGS1Q6ZTW0 290 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 DTX3LQ8TDB6 740 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 CORO1BQ9BR76 489 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 SLC46A2Q9BY10 475 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 INSL6Q9Y581 213 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 PCDHB1Q9Y5F3 818 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 STX16-NPEPL1H3BU86 382 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 STX16O14662 325 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 OR1I1O60431 355 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 CDK14O94921 469 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 FGF19O95750 216 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 RPSAP08865 295 aaKnown RBP16.59■□□□□ 0.25
SAMM50-201ENST00000350028 GJA1P17302 382 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 IL2P60568 153 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 ANKS6Q68DC2 871 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 LRRC74BQ6ZQY2 392 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 DSELQ8IZU8 1212 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 RCN3Q96D15 328 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 MARK4Q96L34 752 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 TTC1Q99614 292 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 P2RY12Q9H244 342 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 ATP13A3Q9H7F0 1226 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 PLK2Q9NYY3 685 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 IRAK3Q9Y616 596 aa16.59■□□□□ 0.25
SAMM50-201ENST00000350028 A0A0J9YYE9 177 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 E5RI56 91 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 NVLO15381 856 aaKnown RBP16.58■□□□□ 0.24
SAMM50-201ENST00000350028 KLK8O60259 260 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 NIPSNAP2O75323 286 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 ECI2O75521 394 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 PDE5AO76074 875 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 SIX3O95343 332 aaPredicted RBP16.58■□□□□ 0.24
SAMM50-201ENST00000350028 PRAMEF12O95522 483 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 GLUD1P00367 558 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 TRBC1P01850 177 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 FGBP02675 491 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 ALPIP09923 528 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 ANPEPP15144 967 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 TSPAN8P19075 237 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 CHRM3P20309 590 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 DDX6P26196 483 aaKnown RBP eCLIP16.58■□□□□ 0.24
SAMM50-201ENST00000350028 CD70P32970 193 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 ATP4BP51164 291 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 CDH13P55290 713 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 SESN3P58005 492 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 SH3BP2P78314 561 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 TSNQ15631 228 aaKnown RBP16.58■□□□□ 0.24
SAMM50-201ENST00000350028 UGT3A2Q3SY77 523 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 ADGRG6Q86SQ4 1221 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 PGAM4Q8N0Y7 254 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 PAF1Q8N7H5 531 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 SIDT2Q8NBJ9 832 aaKnown RBP16.58■□□□□ 0.24
SAMM50-201ENST00000350028 PPFIBP2Q8ND30 876 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 GIMAP7Q8NHV1 300 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 CD200R1Q8TD46 325 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 FUBP1Q96AE4 644 aaKnown RBP16.58■□□□□ 0.24
SAMM50-201ENST00000350028 EID2BQ96D98 161 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 LMLNQ96KR4 655 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 C1QTNF3Q9BXJ4 246 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 ZFYVE1Q9HBF4 777 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 MID1IP1Q9NPA3 183 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 GALPQ9UBC7 116 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 CLEC4EQ9ULY5 219 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 POMPQ9Y244 141 aa16.58■□□□□ 0.24
SAMM50-201ENST00000350028 CDC7O00311 574 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 BTN3A1O00481 513 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 PRMT5O14744 637 aaPredicted RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 AZIN1O14977 448 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 CLASP2O75122 1294 aaKnown RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 TSPAN12O95859 305 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 CD1EP15812 388 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 ZNF7P17097 686 aaPredicted RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 RPS3P23396 243 aaKnown RBP eCLIP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 EEF1DP29692 281 aaKnown RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 SNRPD1P62314 119 aaKnown RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 STX5Q13190 355 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 ART3Q13508 389 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 LYPLAL1Q5VWZ2 237 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 CLEC6AQ6EIG7 209 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 LARP4Q71RC2 724 aaKnown RBP eCLIP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 RTL10Q7L3V2 364 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 OR2AP1Q8NGE2 309 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 OR6K2Q8NGY2 324 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 ISG20Q96AZ6 181 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms