RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SLC13A2Q13183 592 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ZBTB6Q15916 424 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ZIK1Q3SY52 487 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CCDC58Q4VC31 144 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 BPHLQ86WA6 291 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC41A1Q8IVJ1 513 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CNTN4Q8IWV2 1026 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 RIMKLAQ8IXN7 391 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SVOPQ8N4V2 548 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ASCC1Q8N9N2 400 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CCNYQ8ND76 341 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 NDNFQ8TB73 568 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SUN5Q8TC36 379 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 HTRA1Q92743 480 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TMEM125Q96AQ2 219 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 LRRC58Q96CX6 371 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 YIPF6Q96EC8 236 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 PPP1R2P1Q96PQ5 205 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 NODALQ96S42 347 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 NPY6RQ99463 290 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 OMDQ99983 421 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 FDXACB1Q9BRP7 624 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TNFRSF12AQ9NP84 129 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CNGB3Q9NQW8 809 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 FAM49BQ9NUQ9 324 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SATB2Q9UPW6 733 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 FIS1Q9Y3D6 152 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SCN1AP35498 2009 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ZNF236Q9UL36 1845 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 A0A087X1B8 175 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 EEF2KO00418 725 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ANGPT2O15123 496 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 AXIN1O15169 862 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 MATN4O95460 622 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 EGFRP00533 1210 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 GJB1P08034 283 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ALDOCP09972 364 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 MTHFD1P11586 935 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CAPN3P20807 821 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 IL12AP29459 219 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 AVPR1AP37288 418 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 GRIK1P39086 918 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 PNPLA4P41247 253 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 GSK3BP49841 420 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TKTL1P51854 596 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ATXN1P54253 815 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 GNG2P59768 71 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 IGBP1P78318 339 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CDH17Q12864 832 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 PCBP1Q15365 356 aaKnown RBP eCLIP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TRIM71Q2Q1W2 868 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CATSPEREQ5SY80 951 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 RSBN1Q5VWQ0 802 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 NAPEPLDQ6IQ20 393 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TMC5Q6UXY8 1006 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CYHR1Q6ZMK1 362 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 FAM35AQ86V20 835 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 DNAAF3Q8N9W5 541 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SPERTQ8NA61 448 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SIMC1Q8NDZ2 872 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 OR6B3Q8NGW1 331 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 PSMA8Q8TAA3 256 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 HCAR2Q8TDS4 363 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TRAPPC12Q8WVT3 735 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 FAR1Q8WVX9 515 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 KCTD13Q8WZ19 329 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC2A13Q96QE2 648 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ZNF300Q96RE9 604 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CDK5RAP1Q96SZ6 601 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 KIFC1Q9BW19 673 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SLIRPQ9GZT3 109 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 NTN4Q9HB63 628 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 CCDC177Q9NQR7 707 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SCAF8Q9UPN6 1271 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 PCDHGA8Q9Y5G5 932 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 PDCD11Q14690 1871 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TSC2P49815 1807 aa10.27□□□□□ -0.76
CHRNA1-202ENST00000348749 RAD51BO15315 384 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 TBC1D4O60343 1298 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 SOAT2O75908 522 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 CRYZL1O95825 349 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 CD4P01730 458 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 DPEP1P16444 411 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 STMN1P16949 149 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 IMPDH1P20839 514 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 YWHAQP27348 245 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 EEFSECP57772 596 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 CDC42EP1Q00587 391 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 C19orf57Q0VDD7 668 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 OLIG2Q13516 323 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 KRR1Q13601 381 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 TTLL4Q14679 1199 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 FXNQ16595 210 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 IMPG1Q17R60 797 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 PYCR3Q53H96 274 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 WDR45BQ5MNZ6 344 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 OTUD3Q5T2D3 398 aaPredicted RBP10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 RFPL4BQ6ZWI9 263 aa10.27□□□□□ -0.77
CHRNA1-202ENST00000348749 BEND5Q7L4P6 421 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms