RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 FASTKD1Q53R41 847 aaKnown RBP18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 ZDHHC20Q5W0Z9 365 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 KIAA0895LQ68EN5 471 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 ZNF449Q6P9G9 518 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 SNX20Q7Z614 316 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 CILP2Q8IUL8 1156 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 TRAM1L1Q8N609 369 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 DEFB119Q8N690 84 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 OTUD6BQ8N6M0 293 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 C2CD4AQ8NCU7 369 aaPredicted RBP18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 FUBP1Q96AE4 644 aaKnown RBP18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 FAM122AQ96E09 287 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 KLF6Q99612 283 aaPredicted RBP18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 FAM167BQ9BTA0 163 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 DHRS4Q9BTZ2 278 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 FBXO6Q9NRD1 293 aaPredicted RBP18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 RAD18Q9NS91 495 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 ZFATQ9P243 1243 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 FBXO5Q9UKT4 447 aa18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 CNOT6Q9ULM6 557 aaKnown RBP18.88■□□□□ 0.61
CHMP4A-201ENST00000347519 AGAP14A8MT82 685 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 MAP2K7O14733 419 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 S1PR4O95977 384 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 PCCBP05166 539 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 ITGALP20701 1170 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 AVPR2P30518 371 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 SLCO1A2P46721 670 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 DPTQ07507 201 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 DBN1Q16643 649 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 KLHL38Q2WGJ6 581 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 PACS1Q6VY07 963 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 TAS2R42Q7RTR8 314 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 SERPINA9Q86WD7 417 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 DCAKDQ8WVC6 231 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 SLC44A1Q8WWI5 657 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 CENPTQ96BT3 561 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 PAFAH2Q99487 392 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 MYOCQ99972 504 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 MCMBPQ9BTE3 642 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 CTNNAL1Q9UBT7 734 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 CA5BQ9Y2D0 317 aa18.87■□□□□ 0.61
CHMP4A-201ENST00000347519 SMIM23A6NLE4 172 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 AGPSO00116 658 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 LATO43561 262 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 HAUS5O94927 633 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 FSBPO95073 299 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 AHSGP02765 367 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 OGNP20774 298 aaKnown RBP18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 IGFALSP35858 605 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 SGCGQ13326 291 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 TYSND1Q2T9J0 566 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 KHDC1Q4VXA5 237 aaKnown RBP18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 ZNF648Q5T619 568 aaPredicted RBP18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 RAET1GQ6H3X3 334 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 CNSTQ6PJW8 725 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 STRA8Q7Z7C7 330 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 WDR5BQ86VZ2 330 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 NLRP8Q86W28 1048 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 LRRC6Q86X45 466 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 SPNS2Q8IVW8 549 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 ABCA7Q8IZY2 2146 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 DTX3LQ8TDB6 740 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 NAT14Q8WUY8 206 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 ASB12Q8WXK4 309 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 CDKL2Q92772 493 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 BIRC7Q96CA5 298 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 CDH19Q9H159 772 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 CRLS1Q9UJA2 301 aa18.86■□□□□ 0.61
CHMP4A-201ENST00000347519 INPP4BO15327 924 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 OR1I1O60431 355 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 TCEA3O75764 348 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 GPR1P46091 355 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 CCR5P51681 352 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 IFFO1Q0D2I5 559 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 SRSF5Q13243 272 aaKnown RBP18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 LRRC14Q15048 493 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 SETMARQ53H47 684 aaPredicted RBP18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 MRNIPQ6NTE8 343 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 PNCKQ6P2M8 343 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 LRIG3Q6UXM1 1119 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 SLC26A11Q86WA9 606 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 NXPE1Q8N323 547 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 ACVR1CQ8NER5 493 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 CALML6Q8TD86 181 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 ORAI3Q9BRQ5 295 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 ZSCAN5AQ9BUG6 496 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 TMEM109Q9BVC6 243 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 BOCQ9BWV1 1114 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 EURLQ9NYK6 297 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 SLCO1B1Q9Y6L6 691 aa18.85■□□□□ 0.61
CHMP4A-201ENST00000347519 CCDC163A0A0D9SF12 145 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 TLDC2A0PJX2 215 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 MTX2O75431 263 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 ACRV1P26436 265 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 MSH2P43246 934 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 LEPRP48357 1165 aaKnown RBP18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 CLDN2P57739 230 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 B4GALNT1Q00973 533 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 NAB1Q13506 487 aa18.84■□□□□ 0.61
CHMP4A-201ENST00000347519 ITGA9Q13797 1035 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms