RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 LINC00597Q9H2U6 94 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 NKX1-2Q9UD57 310 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 IKZF3Q9UKT9 509 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 SDHDO14521 159 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 GRM6O15303 877 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 KERAO60938 352 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 SIX3O95343 332 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CLDN7O95471 211 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 PRAMEF1O95521 474 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 ESR1P03372 595 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CHRM3P20309 590 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CD9P21926 228 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 PRDX6P30041 224 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CDH13P55290 713 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 BTKQ06187 659 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 TSNQ15631 228 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CDKN3Q16667 212 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 KHDC1Q4VXA5 237 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 ULK2Q8IYT8 1036 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 STK40Q8N2I9 435 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 AFAP1L2Q8N4X5 818 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 NKAPQ8N5F7 415 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 KCNJ9Q92806 393 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 VOPP1Q96AW1 172 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 TRMT6Q9UJA5 497 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 RNF112Q9ULX5 631 aa14.03□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CXorf51AA0A1B0GTR3 108 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CAPN8A6NHC0 703 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 A8MX80 341 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 E5RI56 91 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CDC7O00311 574 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 GAPDHSO14556 408 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 TSPAN12O95859 305 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 GFAPP14136 432 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CD1EP15812 388 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 SYN1P17600 705 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 HOXA9P31269 272 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 PPARGP37231 505 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 C1QTNF8P60827 252 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 UBE3AQ05086 875 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 MYLK3Q32MK0 819 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 ACCSLQ4AC99 568 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 ACSBG2Q5FVE4 666 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 ZNF697Q5TEC3 545 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 C22orf39Q6P5X5 142 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CERS6Q6ZMG9 384 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 RAB44Q7Z6P3 723 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CPSF7Q8N684 471 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CEP70Q8NHQ1 597 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 GIMAP7Q8NHV1 300 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CD200R1Q8TD46 325 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 IRF7Q92985 503 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 ISG20Q96AZ6 181 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CATSPER2Q96P56 530 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 P2RY12Q9H244 342 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 ZNF385DQ9H6B1 395 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 TRAF6Q9Y4K3 522 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 HCFC2Q9Y5Z7 792 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 COMMD10Q9Y6G5 202 aa14.02□□□□□ -0.16
CDK5RAP1-202ENST00000346416 CCDC189A1A4V9 331 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 LRRC14BA6NHZ5 514 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 IQCF5A8MTL0 148 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SUPT3HB4E1H0 165 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 H0Y3Z8 333 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 BTN3A1O00481 513 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 XYLBO75191 536 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SUPT3HO75486 399 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ARHGEF15O94989 841 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 TYRP14679 529 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PIK3R1P27986 724 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SATB1Q01826 763 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PREPLQ4J6C6 727 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 WLSQ5T9L3 541 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CLEC6AQ6EIG7 209 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 C7orf61Q8IZ16 206 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 EEF1AKMT1Q8WVE0 214 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 FUBP1Q96AE4 644 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 MARK4Q96L34 752 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ZSWIM3Q96MP5 696 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 MEAF6Q9HAF1 191 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SARS2Q9NP81 518 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 IL26Q9NPH9 171 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SPHK2Q9NRA0 654 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SLC7A8Q9UHI5 535 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SLCO3A1Q9UIG8 710 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RWDD3Q9Y3V2 267 aa14.02□□□□□ -0.17
CDK5RAP1-202ENST00000346416 RANBP2P49792 3224 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ANKRD12Q6UB98 2062 aa14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 A0A088AWK7 358 aa14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 NPEPPSL1A6NEC2 478 aa14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PRMT5O14744 637 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CLASP2O75122 1294 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 ECI2O75521 394 aa14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 PABPC1P11940 636 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 MYOGP15173 224 aa14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 IL2P60568 153 aa14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 SH3BP2P78314 561 aa14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 NFATC2Q13469 925 aa14.01□□□□□ -0.17
CDK5RAP1-202ENST00000346416 CUL3Q13618 768 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms